Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04168 ATGTCTCTTTCATCCACAGAGTCTGTATACGTAACAGAGGAGTGTGTTCGCGAATGGAGGAGTGGCAACCCTGCCCTCAAGGTCTCCCAAGCTGTCCCCATGCTGCGATTCCTCTACGAGCTCTGTTGGACTATGGTTAGGGGTGAACTGCCGTTTCCCAAGTGTAAAGTTGCTTTGGATTCTGTCATATTTTCAGAACAAGCTTCCAGTGACAAAATAGCTTCGAATTTTGCTGATATAGTGACCCAGATGGCTCAAGATCATACAATGCCAGAAGATTCGCGTTCTCGTCTTATCAAGCTGGCAAGATGGCTTGTGGAATCTGAAATGGTTCCAATTAGGCTACTTCAAGAACGTTGTGAGGAAGAATTCTTGGGGGAGGCTGAATTGATCAAAATTAAGGCTCAGGACTTGAAGGGTAAAGAGGTCAGAGTTAATACTCGACTTCTCTATCAGCAAACCAAATTCAACCTTCTCAGAGAAGAGAGTGAGGGTTATGCAAAGCTGGTGACTCTTCTTTGCCGGGACTCTGAAGCAACTACACAAAAATCATCTGCAGCAACCATTGGCATTATTAAGTCATTAATTGGCCATTTTGATTTGGATCCAAATCGCGTTTTTGATATTGTCCTAGAGTGTTTTGAACTGCAGCCTGATGATGATGTGTTTATAGAGTTGATTCCCATATTTCCAAAGTCTCATGCGTCACAGATTCTTGGGTTCAAATTTCAATATTATCAACGCATGGAAGTTGTCAGCTCTGTTCCATTTGGGCTCTATAGACTCACAGCCTTGCTGGTGAAGCAGGATTTTATTGATCTTGATAGCATATACACTCATCTACTTCCCAGAGATGTTGAGGCATTTGAGCATTACAATACTTTCTCTTCCAAGCGACTTGAAGAGGCTAATAAAATTGGAAGAATAAACCTTGCTGCGACTGGAAAAGATCTAATGGATGATGAGAAACAGGGGGATGTCAGTATAGATCTCTTTGCTGCCCTAGACCTTGAAACAGAAGCAACTGAAGAGCGGACAACTGAGCTTCAAACCAGTCAGACTTTGGGCTTGCTCACTGGCTTTCTTTCGGTGGATGACTGGTATCATGCATATCTATTATTTGAGCGCCTTTCACCACTCAATGCTGTGGAACATAGTCAAATATGTGATAGTTTGTTCAGACTTATTGAGAAGACCATCTGTTCAGCATATGATGTTGTCCGTCAGACACATCTTCAAAATCCTGGATCATCGTCAGGAGGCACTGATGTTATGGATGTTGATAACACTTCAGGATATAATTCTTTCATAGATCTTCCTAAGGAACTTTTTCAGATGCTTTCTTGTACTGGACCTTATCTCTACCGTGATACTATACTGTTGCAGAAGGTTTGTAGGGTCTTGAGAGGTTATTACCTTTCGGCTCTTGAGCTTGTAAGTCGTGGCAATGGTGCCTTGAATCCTCAATTGCATTTTCCTGGAAACCCTAACTTACATCTTAAGGAGGCACGGCTAAGGGTGGAGGATGCTTTAGGAGCATGTGTACTTCCTTCTCTGCAGTTAATTCCCGCCAATCCTGCTGTTGGGCAGGAGATATGGGAACTAATGAGTCTTCTTCCTTATGAGGTGCGATATCGTTTGTATGGTGAATGGGAAAAAGATGATGAGTGCATTCCTATGCTCTTAGCTGCAAGACAAACTGCCAAGTTGGACACTAGGCGTATTTTGAAAAGGCTGGCAAAGGAAAATTTGAAGCAGCTAGGTCGGATGGTTGCAAAATTAGCTCATGCCAACCCAATGACTGTCCTCCGAACAATTGTTCATCAGATTGAGGCTTACAGAGACATGATTACTCCTGTAGTGGATGCATTTAAGTACCTGACTCAGCTTGAGTATGATATATTGGAATATGTTGTGATTGAGCGCTTAGCACTTGGTGGACGTGATAAGTTAAAGGACGATGGCCTTAATTTGTCAGACTGGCTTCAATCTCTAGCCTCATTTTGGGGCCATCTGTGTAAGAAGTACCCATCAATGGAATTACGGGGCCTCTTCCAGTATCTTGTGAATCAGTTAAAAAAGGGGCAAGGAATTGAGCTTGTTCTACTGCAGGAGCTTATTCAACAAATGGCAAATGTCCAGTACACAGAGAACTTGACTGAGGAACAGCTTGATGCAATGGCAGGGAGTGACACTCTCAGATATCAAGCAACTTCTTTTGGTGTAACTCGGAATAATAAGGCATTGATAAAGTCAACTAGCAGACTGAGAGACGCATTACTTCCAAAAGATGAACCAAAGTTGGCAATCCCACTGTTACTACTTCTTGCTCAACATCGATCTCTAGCTGTCGTAAATGCAGATGCACCCTACATTAAGATGGTTAGCGAGCAGTTTGATAGATGTCATGGAACTCTCCTTCAATATGTGGAATTTCTTGGCAGTGCAGTCACCCCATCATCAAGTTATGGCATTCTTATTCCCTCCCTCCATGACCTAGTCCACCTTTACCACCTGGACCCCGAGGTTGCTTTCTTGATATATCGTCCCATAATGAGGCTTTTCAAGTCTCAGAGAGATCCTGATATTTATTGGCCCTTGGATGATAAACGTGGTGCTAGTGATGCATCTTCTAACTTTGAGTCTGATCCTCTGGATAATTCTGGTAGTATGGTACTAAATCTTGGCTCTGCCCAAAATCCTATAAGTTGGTCGTATCTTCTTGATACTGTTAAAACCATGTTACCTCCAAAAGCATGGAATAGCTTATCTCCCGATCTTTATGCAACATTTTGGGGTCTTACGTTATATGATCTATATGTCCCGAAAAATCGATACGAGTCAGAAATAGGCAAGCTGCATGCAAATCTTAAATCATTGGAGGAGCTTTCTGACAATTCGAGCTCAGCAATTACAAAGAGGAAGAAAGAAAAGGAAAGAATTCAAGAATCTCTTGATCGGCTGATTAGTGAACTTCATAAACACGAGGAGAATGTTGCATCTGTTCATAGACGTCTTTCTCATGAAAAGAAAATATGGTTAAGTTCCTGTCCTGACACCTTGAAGATCAACATGGAGTTTCTTCAGCGCTGTATTTTTCCACGCTGTACTTTCAGTATGCCAGATGCTGTTTATTGTGCTATGTTTGTCCACACACTTCATTCCCTTGGAACCCCTTTTTTTAACACAGTCAATCATATAGATGTTTTGATTTGTAAGACCCTACAACCTATGATATGCTGCTGCACTGAATACGAGGCAGGCAGGCTTGGTAGGTTTCTGTATGAGACTTTGAAGATAGCTTACTATTGGAAGAGTGATGAATCTATTTATGAACGTGAGTGTGGAAACATGCCAGGGTTTGCTGTTTACTATAGATATCCAGATAGTCAACGAGTTACATATGGGCAGTTCATTAAGGTACACTGGAAGTGGAGTCAAAGAATCACACGTTTACTAATTCAGTGTCTGGAATCTAGCGAGTACATGGAAATTAGAAATGCACTTATAATGTTGACAAAAATTTCTTGTGTTTTCCCAGTTACCCGGAAGAGTGGGATAAACCTTGAGAAGCGAGTAGCTAAGATTAAAAGTGATGAAAGAGAGGATCTTAAGGTGTTGGCAACTGGTGTTGCAGCAGCATTGGCTGCTAGGAAGCCTTCTTGGGTGACTGATGAAGAATTTGGTATGGGTTATCTTGAGTTGAAACCTGCACCAACCGTGACTAAATCTTCAGCTGGAAATTCAGCAACTGTGCATAGTGGGATGAATCTCAATGTTTCACAAAATGAATCTGCCAGTGGAAAACATGTGGACTCTGGAAACACGGCCAAAGATCAGGTAATAAGAACAAAATCTGCAGATGGAAAGTCTGAAAGAACTGAAAGCATGACTGTGACAAAATCTGATTCTGGCCATACAAAAGTCAAGAGTGGTTCAATGGTAAATGGATTAGATGCCCAAACATCCTCGATCTTACCTTCTATGCAATCTGGGGTGTCAAAGTCTATGGAAAACTCAAAGCAAGTGGAAGAATCGATAAATAGATCATCAGATGAACATGGAACAAGAAATGCTGAGTCAAGAGCTTCAGCAAAGCGATCGGTGCCTACTGGTTCACTTTCAAAACCATCAAAACAAGAGCCTGTAAAAGAAGATAGTAGGTCTGGAAAACCTGTTGCTAGAACTTCAGGCTCCTTGAGTAGTGACAAGGATCTACAAACCCATGCATTGGAGGGAAGACACGGTGGAACTACCAATGTAACTTCTTTAGTCAGTGCTAATGGTAACACCATTACAGGTTCTACTAAAGGTTCAAACCCACCAATAAGGATTTCATTGGATGGTCCTGGTAATGAATCAAAGGCTGAGGCTGGAGTTGCCAAGTCTTCTGATAGTAGAGCATCTGTGGTGAAGGATGAAGGAAATGATACCACTGATTTCACTAGAGGATCCTCTTCTCGCGTAGTTCATTCCCCCAGGCATGAAAACACAGGAATCACTTCAAAATCAAATGAAAAAGTTCAGAAGAGAGCCAGTTCTGCTGAAGAACCAGACAGACTAGGTAAACGACGAAAAGGAGATGTTGAGGTAAGAGATTTTGAAAGTGAAGTTCGATTCTCTGAAAGAGATAAGTTGATGGATCCTCGCTTTTCTGATGAAAAATTGGGACCAGAGGAACATGGTCTGTACAGGGCAGGTGATAAGTCACTGGAACGGCCAAAAGACAAGGGCAATGAAAGATATGACAGGGACCACAGGGAAAGATTAGACCGTATGGACAAGTCTCGGGGTGATGACTCTGTAGCAGAAAAACCTAGGGATAGGTCCCTTGAAAGATATGGAAGAGAACGATCTGTTGAGAGAATGCAAGAGAGGGGTAGTGAGAGGAGTTTTAATAGACTCCCTGAGAAAGCTAAGGATGAAAGAAGCAAGGATGATAGAAATAAGTTACGTTACAGTGATGCATCAGTAGAAAAATCACATGCTGATGATCGCTTCCATGGTCAAAACTTGCCTCCACCACCCCCTTTACCTCCTAATATGGTTCCTCAATCTTTGGGAGCTGGTAGGCGTGATGAAGATGCTGATAGGAGGTATGGAGCTACGAGGCACTCTCAAAGACTTTCTCCAAGGCATGAAGAAAAGGAACGGAGACGATCAGAAGAGACTGTGGTTTCTCAGGACGATTCAAAACGCCGTAAAGAAGATGATTTTCGAGATCGAAAACGTGAAGAGATTAAGGTTGAAGAGAGGGAGAGAGAAAGAGAGAAACCTAATGTGCTAAAGGAAGACTTGGATTTAAATGCCGCATCCAAGAGACGGAAACTTAAGAGGGAGCACCTAGCAACTGGTGAACCTGGGGAGTACTCACCTGTGGCTCCTCCACCTCCTCCCCCTGGTATTGGTATGTCACTGGGGTATGATGGAAGGGACAGGGGAGACAGAAAGGGACCCGTCATCCAGCATCCAAACTACATAGATGAACCAAATATCAGGATTCACGGTAAAGAGGTTGCCAGCAAGTTGAATCGCCGTGATTCAGACCCCTTGTATGATCGTGAATGGGATGATGAGAAGAGACAAAGAGCTGATCAAAAGCGGAGGCACCGGAAGTAG 5619 0.4269 MSLSSTESVYVTEECVREWRSGNPALKVSQAVPMLRFLYELCWTMVRGELPFPKCKVALDSVIFSEQASSDKIASNFADIVTQMAQDHTMPEDSRSRLIKLARWLVESEMVPIRLLQERCEEEFLGEAELIKIKAQDLKGKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRDSEATTQKSSAATIGIIKSLIGHFDLDPNRVFDIVLECFELQPDDDVFIELIPIFPKSHASQILGFKFQYYQRMEVVSSVPFGLYRLTALLVKQDFIDLDSIYTHLLPRDVEAFEHYNTFSSKRLEEANKIGRINLAATGKDLMDDEKQGDVSIDLFAALDLETEATEERTTELQTSQTLGLLTGFLSVDDWYHAYLLFERLSPLNAVEHSQICDSLFRLIEKTICSAYDVVRQTHLQNPGSSSGGTDVMDVDNTSGYNSFIDLPKELFQMLSCTGPYLYRDTILLQKVCRVLRGYYLSALELVSRGNGALNPQLHFPGNPNLHLKEARLRVEDALGACVLPSLQLIPANPAVGQEIWELMSLLPYEVRYRLYGEWEKDDECIPMLLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANPMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLALGGRDKLKDDGLNLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGQGIELVLLQELIQQMANVQYTENLTEEQLDAMAGSDTLRYQATSFGVTRNNKALIKSTSRLRDALLPKDEPKLAIPLLLLLAQHRSLAVVNADAPYIKMVSEQFDRCHGTLLQYVEFLGSAVTPSSSYGILIPSLHDLVHLYHLDPEVAFLIYRPIMRLFKSQRDPDIYWPLDDKRGASDASSNFESDPLDNSGSMVLNLGSAQNPISWSYLLDTVKTMLPPKAWNSLSPDLYATFWGLTLYDLYVPKNRYESEIGKLHANLKSLEELSDNSSSAITKRKKEKERIQESLDRLISELHKHEENVASVHRRLSHEKKIWLSSCPDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTLQPMICCCTEYEAGRLGRFLYETLKIAYYWKSDESIYERECGNMPGFAVYYRYPDSQRVTYGQFIKVHWKWSQRITRLLIQCLESSEYMEIRNALIMLTKISCVFPVTRKSGINLEKRVAKIKSDEREDLKVLATGVAAALAARKPSWVTDEEFGMGYLELKPAPTVTKSSAGNSATVHSGMNLNVSQNESASGKHVDSGNTAKDQVIRTKSADGKSERTESMTVTKSDSGHTKVKSGSMVNGLDAQTSSILPSMQSGVSKSMENSKQVEESINRSSDEHGTRNAESRASAKRSVPTGSLSKPSKQEPVKEDSRSGKPVARTSGSLSSDKDLQTHALEGRHGGTTNVTSLVSANGNTITGSTKGSNPPIRISLDGPGNESKAEAGVAKSSDSRASVVKDEGNDTTDFTRGSSSRVVHSPRHENTGITSKSNEKVQKRASSAEEPDRLGKRRKGDVEVRDFESEVRFSERDKLMDPRFSDEKLGPEEHGLYRAGDKSLERPKDKGNERYDRDHRERLDRMDKSRGDDSVAEKPRDRSLERYGRERSVERMQERGSERSFNRLPEKAKDERSKDDRNKLRYSDASVEKSHADDRFHGQNLPPPPPLPPNMVPQSLGAGRRDEDADRRYGATRHSQRLSPRHEEKERRRSEETVVSQDDSKRRKEDDFRDRKREEIKVEEREREREKPNVLKEDLDLNAASKRRKLKREHLATGEPGEYSPVAPPPPPPGIGMSLGYDGRDRGDRKGPVIQHPNYIDEPNIRIHGKEVASKLNRRDSDPLYDREWDDEKRQRADQKRRHRK 1872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04168 1872 MobiDBLite consensus disorder prediction 1480 1508 - -
Vian1g04168 1872 MobiDBLite consensus disorder prediction 1690 1785 - -
Vian1g04168 1872 MobiDBLite consensus disorder prediction 1262 1282 - -
Vian1g04168 1872 MobiDBLite consensus disorder prediction 1392 1406 - -
Vian1g04168 1872 Pfam Transcription- and export-related complex subunit 591 666 IPR021726 -
Vian1g04168 1872 MobiDBLite consensus disorder prediction 1300 1344 - -
Vian1g04168 1872 Pfam THO complex subunit 2 N-terminus 35 415 IPR032302 -
Vian1g04168 1872 Pfam THO complex subunit 2 N-terminus 434 589 IPR032302 -
Vian1g04168 1872 Pfam Transcription factor/nuclear export subunit protein 2 920 1214 IPR021418 -
Vian1g04168 1872 MobiDBLite consensus disorder prediction 1283 1299 - -
Vian1g04168 1872 Coils Coil 943 963 - -
Vian1g04168 1872 MobiDBLite consensus disorder prediction 1362 1378 - -
Vian1g04168 1872 Coils Coil 971 1005 - -
Vian1g04168 1872 MobiDBLite consensus disorder prediction 1509 1667 - -
Vian1g04168 1872 MobiDBLite consensus disorder prediction 1830 1864 - -
Vian1g04168 1872 MobiDBLite consensus disorder prediction 1345 1361 - -
Vian1g04168 1872 PANTHER THO2 PROTEIN 3 1775 IPR040007 GO:0000347|GO:0006397|GO:0006406
Vian1g04168 1872 MobiDBLite consensus disorder prediction 1413 1442 - -
Vian1g04168 1872 MobiDBLite consensus disorder prediction 1262 1872 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04168 1 64707584 64727381 Vian1g04168 1 64707584 64727381 ECH