Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04152 ATGGCCGCCGCCGAACACGGAATAAGCGTCGAACCTGAGAGAAAGAGCCTTCTCAGCCAACACACCGAGAAGCACTTCACCGCCGGCGAAATAGTCCGCGACATCATCATCGGCGTTTCCGACGGCCTCACCGTCCCCTTCGCCCTCGCCGCCGGCCTCTCCGGCGCCAATGCCACCTCCTCCATCGTTCTCACCGCTGGCATAGCCGAAGTCGCCGCTGGCGCCATCTCCATGGGACTCGGCGGTTATTTGGCAGCAAAAAGTGAAACCGATAATTACCAGAGGGAATTGAAAAGAGAGCAAGAAGAAATTATCACGATGCCGGAAACTGAAGCGGCAGAGGTGGCAGAAATACTAGCTCAGTATGGGATCGAGGCACACGAATATGCACCTGTGGTGAATGCTCTCAGAAAAAACCCTCAGGCATGGCTTGATTTCATGATGAGATTTGAGCTGGGACTAGAGAAACCAGATCCAAAGAGAGCATTGTATAGTGCAATGACAATCGCCATCGCTTACATATTGGGAGGGGTTGTCCCTCTCCTTCCTTACATGTTCATTGCAAGGGCATCAGAAGCGGTTGTGTTCTCAGTTATAGTTACCTTGGTTGCATTGCTGGTTTTTGGTTATGCCAAGGGTTACTTTACGGGCAATAAACCATTCAGGAGTGCTTTGGAAACAGCTCTAATAGGTGCCATCGCCTCTGCAGCTGCTTTTGGTATGGCAAAGGCTTTCAATCCATAG 744 0.5134 MAAAEHGISVEPERKSLLSQHTEKHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANATSSIVLTAGIAEVAAGAISMGLGGYLAAKSETDNYQRELKREQEEIITMPETEAAEVAEILAQYGIEAHEYAPVVNALRKNPQAWLDFMMRFELGLEKPDPKRALYSAMTIAIAYILGGVVPLLPYMFIARASEAVVFSVIVTLVALLVFGYAKGYFTGNKPFRSALETALIGAIASAAAFGMAKAFNP 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04152 247 Coils Coil 83 103 - -
Vian1g04152 247 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 16 245 IPR008217 GO:0005384|GO:0030026
Vian1g04152 247 Pfam VIT family 32 242 IPR008217 GO:0005384|GO:0030026
Vian1g04152 247 CDD CCC1 11 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04152 Vian-Chr1 64500252 64502326 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g04152 1 243 Nodulin-like Gene Family AT3G43660 23.361 1.73e-08 51.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04152 1 64500252 64502326 Vian1g04152 1 64500252 64502326 ECH