Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04132 ATGGCCTGCCTGGTATCTCGCTCGGGAAGGGAATTGCAGAGGTACAACAACATGGGTGGCCGCCAAGTTGTTGGGTGCATACCATATAGATATAAAGAAGACGTAGATGGTAACATGAGTGACGAATTGGAAGTACTGGTCGTTAGTTCTCAGAAAGGCCAAGGATTCATGTTCCCTAAGGGAGGATGGGAACTTGATGAATCTGTAGAAGAAGCAGCTTGTAGGGAATCTCTTGAAGAAGCAGGAGTATTGGGAATTATTGAGCATGAATTGGGGCAGTGGTATTTCATCAGCAAAAGACATGGCATATACTATGAAGGACACATGTTCCCCATGTTTGTCAAGGAACAGCTTGACACGTGGCCGGAGAAAGATTTACGGAGAAGAATTTGGATGACTGTTGGTGAAGCTAGAGAAGTTTGTCAGCATTGGTGGATGAAGGAGGCATTAGATATATTGGTTCAAAGAATAATGTTGTCTTCAGAACAAGGAAAAAAGGATATGGTTTTGGATGATTCTTTAGGTTTTTAA 531 0.4256 MACLVSRSGRELQRYNNMGGRQVVGCIPYRYKEDVDGNMSDELEVLVVSSQKGQGFMFPKGGWELDESVEEAACRESLEEAGVLGIIEHELGQWYFISKRHGIYYEGHMFPMFVKEQLDTWPEKDLRRRIWMTVGEAREVCQHWWMKEALDILVQRIMLSSEQGKKDMVLDDSLGF 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04132 176 FunFam Nudix hydrolase 17, mitochondrial 5 156 - -
Vian1g04132 176 Pfam NUDIX domain 43 139 IPR000086 -
Vian1g04132 176 CDD Nudix_Hydrolase_9 22 147 IPR047198 GO:0016462
Vian1g04132 176 ProSitePatterns Nudix box signature. 61 82 IPR020084 GO:0016787
Vian1g04132 176 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 5 157 - -
Vian1g04132 176 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 157 - -
Vian1g04132 176 ProSiteProfiles Nudix hydrolase domain profile. 19 154 IPR000086 -
Vian1g04132 176 SUPERFAMILY Nudix 14 155 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04132 Vian-Chr1 64349191 64350299 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04132 1 64349191 64350299 Vian1g04132 1 64349191 64350299 ECH