Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04125 ATGTATGCAGTTCCTAGGAATTTCAGATTATTGGAAGAACTAGAGAGAGGTGAGAAGGGAATTGGAGATGGAACCGTTAGCTATGGAATGGATGATGCTGATGACATATACATGCAGTCATGGACCGGGACTATTATTGGCCCCCCTGGTACTGTTCATGAAGGGCGTATCTACCAGCTGAAATTATTTTGTGGCAAGGGTTATCCTGAAAATCCACCATCTGTTAGATTTCAGACTAGGATTAACATGACTTGTGTCAATCACGAAACTGGAGTGGTTGAGCCACATCTGTTTCCTATGCTTGCTAATTGGCAAAGAGAGTGTACAATGGAAGACATTTTGATGCAATTGAAGAAAGAAATGATGTCTCCGCAAAATCGGAAGCTAGCTCAGCCACCTGAAGGCAACGAAGATGGCAGGATTGACCAAAAGGGGCTGGTCCTGAGATGTTGTATCATGTAA 462 0.4329 MYAVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPGTVHEGRIYQLKLFCGKGYPENPPSVRFQTRINMTCVNHETGVVEPHLFPMLANWQRECTMEDILMQLKKEMMSPQNRKLAQPPEGNEDGRIDQKGLVLRCCIM 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04125 153 SUPERFAMILY UBC-like 1 136 IPR016135 -
Vian1g04125 153 Gene3D Ubiquitin Conjugating Enzyme 1 138 IPR016135 -
Vian1g04125 153 FunFam Ubiquitin-conjugating enzyme E2 variant 1C 1 138 - -
Vian1g04125 153 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 5 153 IPR000608 -
Vian1g04125 153 Pfam Ubiquitin-conjugating enzyme 35 129 IPR000608 -
Vian1g04125 153 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 38 127 - -
Vian1g04125 153 SMART ubc_7 8 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04125 Vian-Chr1 64266705 64268533 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04125 1 64266705 64268533 Vian1g04125 1 64266705 64268533 ECH