Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04124 ATGAGATACTTCACAAAATACTTCGATGATCATTGTGATCCACACACAACCTTCACCGTAACAATAACAACACTCTCCCCAAAACACAACACCACGCTTCGCTTCCACGCACGCACCGTGCCAAACCCAACCATGCATCGTCTCCTTCTCCTCTTCATCTTCTCCGTCCTCGCAACCCCCTCTTCCTCCGCCATCGACACCTTCGTCTTCGGCGGTTGCTCCCAGCCCAAGTACACGCCGGGTTCGCCCTACGAGAGCACCGTCAACTCGCTCCTCACCTCGCTCATCAACTCGGCCTCCTTCGCCAACTATAACAACTTCACCCTTGCCGCCGCCTCCTCCGACACCGTCTACGGCCTCTTCCAGTGCCGCGGCGACCTCAACAACGACCAGTGTTCGCGCTGCGTGGCGCGTGCGGTCACTCAGCTCGGCACGCTCTGCTTCGCCTCATGCGGCGGCGCGTTGCAGCTCGAGGGCTGTTTCGTGAAGTACGACAATGCGACGTTTGTCGGGGTGGAGGACAAGACGGTGGTGACCAAGAAATGTGGGCCGTCCGTTGGGTTGACCTCGGACGCGTTGACTCGGAGGGACGCTGTGCTGGCGTATTTGCAGACGCCCGATGGGACTTACAAGACCTTCAGGACAAGCTCGTATGGGGATTTTCAGGGTGTGGCACAGTGCACCGGTGACTTGAGTCCCACCGAGTGCCAGGATTGTCTCTCCGCTGCCATCCAACGGCTCAAGACCGACTGTGGGCCCTCCCCCTGGGCAGAGATGTACCTCGCCAAATGCTACGCGCGCTACTCCCAGGGTGGCTCTCACTCGCGCCCTAATAATAACGGGGAGAAAGAACAGGATGACAGCAATCACAATGATGATGAGATCGAGAAGACACTCGCCATACTGATTGGACTCATTGCCGGTGTTGCTCTGATCATCGTTTTCCTTTCCTTCTTGTCCAAAGTGTGCGAAAAGCAGAAAGAAGCAAACAATGTTGATGAAATCGCTCCGGATTCTTCGTTCTTCTCTTCCCATCTTGGTCTAACTCCTTCTCCATCATCGATTGCTTTTGGGGTTGGCTTTTGA 1086 0.5571 MRYFTKYFDDHCDPHTTFTVTITTLSPKHNTTLRFHARTVPNPTMHRLLLLFIFSVLATPSSSAIDTFVFGGCSQPKYTPGSPYESTVNSLLTSLINSASFANYNNFTLAAASSDTVYGLFQCRGDLNNDQCSRCVARAVTQLGTLCFASCGGALQLEGCFVKYDNATFVGVEDKTVVTKKCGPSVGLTSDALTRRDAVLAYLQTPDGTYKTFRTSSYGDFQGVAQCTGDLSPTECQDCLSAAIQRLKTDCGPSPWAEMYLAKCYARYSQGGSHSRPNNNGEKEQDDSNHNDDEIEKTLAILIGLIAGVALIIVFLSFLSKVCEKQKEANNVDEIAPDSSFFSSHLGLTPSPSSIAFGVGF 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04124 361 Pfam Salt stress response/antifungal 73 166 IPR002902 -
Vian1g04124 361 Pfam Salt stress response/antifungal 212 270 IPR002902 -
Vian1g04124 361 Gene3D - 65 169 IPR038408 -
Vian1g04124 361 Gene3D - 191 271 IPR038408 -
Vian1g04124 361 FunFam cysteine-rich repeat secretory protein 3 65 169 - -
Vian1g04124 361 ProSiteProfiles Gnk2-homologous domain profile. 66 169 IPR002902 -
Vian1g04124 361 ProSiteProfiles Gnk2-homologous domain profile. 174 273 IPR002902 -
Vian1g04124 361 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 49 323 - -
Vian1g04124 361 FunFam Cysteine-rich repeat secretory protein 60 190 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04124 Vian-Chr1 64254168 64257752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g04124 48 268 Receptor kinase-like Gene Family AT4G05200 26.068 7.30e-14 70.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04124 1 64254168 64257752 Vian1g04124 1 64254168 64257752 ECH