Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02783 ATGATCCTTTGTTTCCTGTTGTGTGTAGTTGCCATGGATGATGATGTGTTGAACATGCCCAATTGGGGTTATTATGAACCCTTCAGAGGGGGACATCTTGGTCTGCAGCTCATGCCTGGTATGACTGATCGAGACACCAAGCCATATCTGCCTGCTCGTGATCCAGCTGTGTTAATGGGTGCTAATGGAACTTTTCACCCCAGAGATTGCGTTGTTTCCGAAGCACCAATGCCGTTGAACTATGTCAGAGATAATTGGACAAGCCAAAGGGAAAGGTATTTCAGTATGCAGCAGCCCACAAATCCTAATTATGCTGTTCTTCCTGAAACATCAGTAGCTCCCAACTTGCAAATTATACAACCACCCGATACATCCAGAGATGAGAAAGTGGATAGAATTGAAGAGTTAGTTGTCAAAAAGGAAGGTGGTCAGTCGAAGAAAAGGCAGACTAAGGGTGCTCTGACGACCCCAAAAGCTAAGAAACCTAGGAAGCCGAAGGATAATGGCAATGTTCCAGTTCAACGTGTGAAGCCCCCGAAGAAGACTATGGAGCTTGTAATTAATGGAATTGATATGGACATTTCTGGTCTGCCCATTCCAGTTTGTTCGTGTACCGGGAGTCCTCAGCAGTGTTATCGTTGGGGTTGTGGAGGTTGGCAATCGGCCTGTTGCACCACAAATGTGTCGATATATCCTTTGCCAATGAGCATGAAAAGGCGTGGTGCTAGGATAGCTGGGAGGAAAATGAGCCAAGGTGCCTTTAAAAAGGTTTTAGAGAAACTTGCGGCTGAAGGATATAATTTTGCTAACCCTATTGATCTGAAGACTCATTGGGCGAGACATGGCACCAACAAGTTTGTTACTATCAGGTAG 873 0.4536 MILCFLLCVVAMDDDVLNMPNWGYYEPFRGGHLGLQLMPGMTDRDTKPYLPARDPAVLMGANGTFHPRDCVVSEAPMPLNYVRDNWTSQRERYFSMQQPTNPNYAVLPETSVAPNLQIIQPPDTSRDEKVDRIEELVVKKEGGQSKKRQTKGALTTPKAKKPRKPKDNGNVPVQRVKPPKKTMELVINGIDMDISGLPIPVCSCTGSPQQCYRWGCGGWQSACCTTNVSIYPLPMSMKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLKTHWARHGTNKFVTIR 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02783 290 SMART GAGA_bind_2 12 290 IPR010409 -
Vian1g02783 290 Pfam GAGA binding protein-like family 12 290 IPR010409 -
Vian1g02783 290 PANTHER - 12 290 IPR010409 -
Vian1g02783 290 MobiDBLite consensus disorder prediction 138 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02783 Vian-Chr1 43143742 43144614 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02783 12 290 BBR or BPC Transcription factor family AT2G01930 55.705 1.48e-103 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Vian1g02783 GAGA_bind 4.1e-103 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02783 1 43143742 43144614 Vian1g02783 1 43143742 43144614 ECH