Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01785 ATGGCTGCCACATTCTTCTCTCAATCGCTTCTTCAATCCAACAATCTTTCTCCTTCTTGTCTCTCTCCTCGCATCCCTCATTCTCTGGCTAGCCGTGTCAAACCCTCCTGCCTCGGGGTGGTTTCTGTGAGCAAAAGGGTAAGTGGGGTGGTGCCCAATGCTGCTCTGAAAGCCTTGGAAACTAATTCGGATTTCCCCATTTCGGCTAAGAAGTCCATCGACAACCCCATTGTTGTTATTGATAACTATGACAGCTTTACCTATAATCTTTGCCAGTATATGGGAGAGTTAGGATTTCACTTTGAGGTCTACCGCAATGATGAGTTGACAGTGGAGGAGTTGAAAAGGAAAAATCCTAGAGGAGTGCTAATATCACCTGGGCCAGGGGAACCTCAAGATTCTGGCATATCTTTGCAAACAGTTTTGGAACTTGGACCAACTGTACCATTGTTTGGTGTGTGCATGGGTTTGCAGTGCATTGGTGAGGCTTATGGAGGAAAGATTGTTCGTTCTCCTTATGGTGTCATGCATGGAAAAAGTACCTTGGTTTATTATGATGAACAAGGAGAAGATGGAGTACTTGCTGGACTGTCAAATCCTTTCTTGGCTGGTAGATATCACAGCCTTGTGATTGAGAAAGAGAGTTTTCCTGATGAACTTGAGGCAACTGCCTGGACAGAAGATGGTCTTATAATGGCTGCTCGCCATAAGAAATATAAGCATTTGCAGGGAGTTCAGTTTCATCCGGAGAGCATCATAACTCCAGAAGGGAAGAAAATTGTCCAAAATTTTGTGAAGCTTATTGAGAGAATGGAGGGTGGTGGTTCTTAA 831 0.4428 MAATFFSQSLLQSNNLSPSCLSPRIPHSLASRVKPSCLGVVSVSKRVSGVVPNAALKALETNSDFPISAKKSIDNPIVVIDNYDSFTYNLCQYMGELGFHFEVYRNDELTVEELKRKNPRGVLISPGPGEPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAYGGKIVRSPYGVMHGKSTLVYYDEQGEDGVLAGLSNPFLAGRYHSLVIEKESFPDELEATAWTEDGLIMAARHKKYKHLQGVQFHPESIITPEGKKIVQNFVKLIERMEGGGS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01785 276 PRINTS Glutamine amidotransferase superfamily signature 244 257 - -
Vian10g01785 276 PRINTS Glutamine amidotransferase superfamily signature 122 131 - -
Vian10g01785 276 PRINTS Glutamine amidotransferase superfamily signature 149 160 - -
Vian10g01785 276 FunFam Anthranilate synthase beta subunit 1 75 267 - -
Vian10g01785 276 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 119 133 - -
Vian10g01785 276 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 149 165 - -
Vian10g01785 276 Pfam Glutamine amidotransferase class-I 78 265 IPR017926 -
Vian10g01785 276 CDD GATase1_Anthranilate_Synthase 77 265 IPR006221 -
Vian10g01785 276 NCBIfam glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 77 266 IPR006221 -
Vian10g01785 276 SUPERFAMILY Class I glutamine amidotransferase-like 77 271 IPR029062 -
Vian10g01785 276 PANTHER MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED 68 272 - -
Vian10g01785 276 PRINTS Anthranilate synthase component II signature 122 131 - -
Vian10g01785 276 PRINTS Anthranilate synthase component II signature 175 183 - -
Vian10g01785 276 PRINTS Anthranilate synthase component II signature 244 257 - -
Vian10g01785 276 PRINTS Anthranilate synthase component II signature 198 210 - -
Vian10g01785 276 PRINTS Anthranilate synthase component II signature 77 91 - -
Vian10g01785 276 PRINTS Anthranilate synthase component II signature 149 160 - -
Vian10g01785 276 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 76 274 - -
Vian10g01785 276 Gene3D - 75 267 IPR029062 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01785 Vian-Chr10 29653625 29656940 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01785 10 29653625 29656940 Vian10g01785 10 29653625 29656940 ECH