Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01773 ATGTCGGTCACTTTGGACTATGCTGGTCAAAGAGCTGAAGCTATTCCTCAATCCACACCAATACCGAATTGGACTATTCATGTGTCAGACATAAGAACAGTTAAGGTTAGCAACATATCACTGGTTACTTCCAAGGTGGAGATTCGAGAATTCTTTTCATTCTCAGGTGATATTCAGTATATTGAGATGCAAAGGGAAAGTGACCGCACTCAAGTTGCTTATGTTACATTTAAGGATACACAGGGAGCAGATACAGCAGTTCTCTTAACAGGTTCAAAGATAGGTGATCTATATGTCACAATCGCACCTGTGGAGAAGTATCAGCTTCCCCCTGATGCTGTTCCAGTAAGTCCGAGAAACCAAAGTGGTGATGCAGTAAAGAAGGCTGAAGATGTAATGAGCACCATGCTTGCTAAGGGTTTCATTTTAGGAAAGGATGCCATCAACAAGGCAAAAGCCTTTGATGAGCGTCACCAGTTGACCTCAAATGCATCTTCCAGAGTTGCTTCCATTGATCGTAGAATGGGTTTCAGTGACAAAATAAGTATTGGAACAGCTATTGTGAATGGAAAAGTGAGAGAGATGGATGAAAAATATCAGCTTTCTGAAATGACAAAGTCTGCTCTTGCTGCTGCAGAGCAAAAGGCAAGCAGTGCTGGATCTGCTATCATGAGCAATTCTTATGTATCAACTGGAGCTTCATGGGTGTCTAGTGCCTTTAATGCTATAGCAAAGGCAGCAGGGGATGTCAGCAGCATGACAAGGGAGAAGGTTGAACAGGCAGAGGTGGAAAGGAATGAGATCATTTATAGTGAAAGGAAAGGGACTGTTGACGAATTTGGAATGAAACGCTTTCAGGATGCTTCAGACATGGGTCCTGCAATAGTTCCTGTTAATTCACATGATGACCATAAGCTAGAAATTATATAA 930 0.4204 MSVTLDYAGQRAEAIPQSTPIPNWTIHVSDIRTVKVSNISLVTSKVEIREFFSFSGDIQYIEMQRESDRTQVAYVTFKDTQGADTAVLLTGSKIGDLYVTIAPVEKYQLPPDAVPVSPRNQSGDAVKKAEDVMSTMLAKGFILGKDAINKAKAFDERHQLTSNASSRVASIDRRMGFSDKISIGTAIVNGKVREMDEKYQLSEMTKSALAAAEQKASSAGSAIMSNSYVSTGASWVSSAFNAIAKAAGDVSSMTREKVEQAEVERNEIIYSERKGTVDEFGMKRFQDASDMGPAIVPVNSHDDHKLEII 309
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01773 309 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 106 IPR000504 GO:0003723
Vian10g01773 309 SMART rrm1_1 33 102 IPR000504 GO:0003723
Vian10g01773 309 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 36 96 IPR000504 GO:0003723
Vian10g01773 309 SUPERFAMILY RNA-binding domain, RBD 18 108 IPR035979 GO:0003676
Vian10g01773 309 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 31 261 - -
Vian10g01773 309 Gene3D - 28 102 IPR012677 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vian10g01773 Vian-Chr10 29486402 29489423 Transposed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01773 10 29486402 29489423 Vian10g01773 10 29486402 29489423 ECH