Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01772 ATGATAACCAGATCGAGGAAATTGAAGCGCAAGCTCGAGTTAGAGCCACCTCCGGTCATCGTCACTAAGAAGCATAGGCAGAAGTTGCCTCGCCGGCGAAGGCAAAATTTCTCTCCTGTTCTTCTAGTCAGTGACTCTTGCCAGAATCCTTGTTTCTCCGTGGATTCCAGTTCCGGTTCTGACTTTGCTGCCGGCGGTGCTTCTTGCAACTCCAGCAGAGCTTCCATAGCCGGCAAGGGAAACAGGAACTCAAGAAATGAATCATCGATCGATTCAATGAGAAATCAGAGGTTCGAGAAACGAGATGAGAACGAAGTGGAGGTGTCGGAGTCTTCGTGCGCGGACTCCAATTCGTTCGCTCGAGATCGAAGCAGGAGGTCAATTCTGAAGTTCAAAAGCGGAAGAGAATATAATAATCTGAGAGGAGAAGATGACGTTTCGGAAGTTTACATAAAGTCGGATATTACTGGTATTCTGAAGTTGAATAGTGGAAGCGAGAGTAAGAACGTAGAGAAAAATGACGACGTTTCGTGCGGGAAATCAGAGATAACTTGCGAGGAACAGTTCAATTCGAAGTCCTCCAGTGGGAACGGAAACATGAAAATCTCTTCGGAGTCAAACGGAAACGACGTCGTATCGTTTAGTTCCTTTGTTCGCGCGTCGCTAGAGGAGGAAAAGAATAGCAGCAAGGAAAACAGAGCGTTGGAATGTGAATACTCTGCAGGCTCTAAAAATCTCCACGCGGAAGAGAATTGCGGGGATTTAGTAGCGCAATCGGTGACAAGGCAGGAATCGGAAAATTACGATGTCGTTGCGGACCTCACTTGCTCTGAGGAATTGTGTTTCTCATACTGTGACGACGATGACGAATCGGAATATTGTTCCAGTCACGGAACTGTGTTCTCTGAATTTCATTCTGAGATTTTCGGTGAATGCTCGCAGCAGGAGCTTTCGGATTACACTCCGTCGCTGTTCGTGGATTCTGGAAGCCAGTTTTCCGAGGGATCCGACGGAGAAACTTCTTCACCAACGTATTTGTTGTTCCTTCAGTATCGCAAGGAGTTCACGACTCTAACTTCTGCTTCTCCAGTGGTGAACTCTTCTTCAAGTGACGAAGATGAAGCCGATTTTGTGAGATTCGAAGATTCTGATGACGAAGACAGCTACCAGATGCTGAGGAAGAGGGAGAGGAAGCAAGGTTTTGTGTCGAATTATGGTGAAAGATATTTCTCTACCACTGAATTCGGAGAGACCGTGCTTGAGCAACGTACGCAAATGGTTCACTGGATCGTTGAGCAATCTTGTCGAAAACAGCTTCGGCAAGAGACGATTTTTCTTGGCGTCAACCTACTTGACCGTTTCCTAAACAAAGGATACTTCAAAGCCCAAAAACGCCTTCAAATTGTTGGAATAGCTTGCCTCACGTTAGCAACCAGGATCGAAGAAAATCAGCAATACAATAGCTTTTACCTAAAAGCAGCCAATGCTGATGCAGTCGTTGAGAAGAGGGTCAAGTATCTGGCAGTGCTGACACTGTCATCTCATGAGCAACTGTGTTACTGGCCTTCAACAGTTGCTGCAGCACTTGTAGTCCTGGCTGGTCTTGAATTCAATCAATGTTCACCGCTCAAAGTAATCGGGATCCACGTTAGATCAAAAGATGAGAATTTGTACGAGTGCATAGAGAGCCTGGAAACGCTGTTACGCTATATAGGATAA 1719 0.4602 MITRSRKLKRKLELEPPPVIVTKKHRQKLPRRRRQNFSPVLLVSDSCQNPCFSVDSSSGSDFAAGGASCNSSRASIAGKGNRNSRNESSIDSMRNQRFEKRDENEVEVSESSCADSNSFARDRSRRSILKFKSGREYNNLRGEDDVSEVYIKSDITGILKLNSGSESKNVEKNDDVSCGKSEITCEEQFNSKSSSGNGNMKISSESNGNDVVSFSSFVRASLEEEKNSSKENRALECEYSAGSKNLHAEENCGDLVAQSVTRQESENYDVVADLTCSEELCFSYCDDDDESEYCSSHGTVFSEFHSEIFGECSQQELSDYTPSLFVDSGSQFSEGSDGETSSPTYLLFLQYRKEFTTLTSASPVVNSSSSDEDEADFVRFEDSDDEDSYQMLRKRERKQGFVSNYGERYFSTTEFGETVLEQRTQMVHWIVEQSCRKQLRQETIFLGVNLLDRFLNKGYFKAQKRLQIVGIACLTLATRIEENQQYNSFYLKAANADAVVEKRVKYLAVLTLSSHEQLCYWPSTVAAALVVLAGLEFNQCSPLKVIGIHVRSKDENLYECIESLETLLRYIG 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01772 572 ProSitePatterns Cyclins signature. 423 454 IPR006671 -
Vian10g01772 572 MobiDBLite consensus disorder prediction 189 208 - -
Vian10g01772 572 Gene3D - 485 571 - -
Vian10g01772 572 Gene3D - 401 484 - -
Vian10g01772 572 Pfam Cyclin, N-terminal domain 417 485 IPR006671 -
Vian10g01772 572 Pfam Cyclin, C-terminal domain 488 568 IPR004367 -
Vian10g01772 572 SUPERFAMILY Cyclin-like 382 487 IPR036915 -
Vian10g01772 572 SMART cyclin_7 428 509 IPR013763 -
Vian10g01772 572 Gene3D - 389 400 - -
Vian10g01772 572 PANTHER CYCLINS 365 489 IPR039361 -
Vian10g01772 572 SUPERFAMILY Cyclin-like 486 568 IPR036915 -
Vian10g01772 572 MobiDBLite consensus disorder prediction 58 91 - -
Vian10g01772 572 MobiDBLite consensus disorder prediction 92 108 - -
Vian10g01772 572 MobiDBLite consensus disorder prediction 58 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01772 Vian-Chr10 29479796 29485260 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01772 387 539 Core Cell Cycle Gene Families AT5G11300 26.633 7.49e-11 62.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01772 10 29479796 29485260 Vian10g01772 10 29479796 29485260 ECH