Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01771 ATGGAAGCTACACACATTCGAGAAAAGGGTGTTGTTGTTGAGGGAAGTGAAAACATTGCTGGTGGGAAAGAAAATGAAGAAGTTCTCAAGAAGATTATTGCAACTCATCCTTTGTATGAAGTTTTGATTCAATCTCACATCAACTGCTTGAAGGTGGGATTAAGTGATGCAGAAGTGTTTGATGATGATGAACTGAAGAAGCTGATGAATTCAAAGTCCAAATTAGCACCTGGTGCAAACACTTCAGAGTTAGATCACTTCATGGAAGCTTATTGCATGGCACTGAGCAAGCTGAAAGAGGCAATAGAAGAACCAACAAAAGAAACGAATGCTTTCATCAGAGCCACGTATCATGAACTAAAGCAACTGGAAGAAGTGAAGAACCCATAA 390 0.3949 MEATHIREKGVVVEGSENIAGGKENEEVLKKIIATHPLYEVLIQSHINCLKVGLSDAEVFDDDELKKLMNSKSKLAPGANTSELDHFMEAYCMALSKLKEAIEEPTKETNAFIRATYHELKQLEEVKNP 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01771 129 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 15 128 - -
Vian10g01771 129 SMART KNOX1_2 27 77 IPR005540 GO:0003677|GO:0005634
Vian10g01771 129 SMART KNOX2_2 73 125 IPR005541 GO:0003677|GO:0005634
Vian10g01771 129 Pfam KNOX1 domain 29 53 IPR005540 GO:0003677|GO:0005634
Vian10g01771 129 Pfam KNOX2 domain 82 123 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01771 Vian-Chr10 29473284 29474567 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01771 27 123 Homeobox Transcription Factor Family AT4G08150 33.010 8.04e-11 56.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01771 10 29473284 29474567 Vian10g01771 10 29473284 29474567 ECH