Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01765 ATGGGTAAAACAATTGAGTTGTATGGATTTCCTATTCCTGTTACAGCGGCTCAAGTGAAGATATTTGTAGAGAATTTTACTGGTGAAGGAACTATCCAAAAATTGAAGGTAAGACATGGCAAAGGTCGGGTTCCAAGAGCATTCGCTATTATTCAATTCACCACAGAAGAATTTGCTACATCTATGATGTCGAGGGCTAATAACGTTTCAAGAGCATTGCGGTATGGAACCGCTTATTTAAAAGCTCGGGTAATGGAAAGAGATATTGAAAAGATAAGTGAGAATGTGACTAGTTTGGAAGGTGTGAAACTGTATTTTGGCTGTCAGATCTCTAAAGGAAGATTTGCTGTTTTGGAGAGAATGCAGAATGTCAGTTTAAGTTTTGGGAGTGGAAAGAGAAAGGTGGAGTTGAAATTTTCACGTGACTTTGTGCAATACAAACTTCAGCTTTCATACGAGAACATTTGGAAGGTTGAGCTGCTTCGACCACGGGATAAAACTGCACGTTATCTCCTTGTTCAGTTACTTGGTGCTCCCCGGATATTTGAGAACGACCCATTTACGTGCACTGATGAATATGACAATATGTTTGAGGATCCTTTGTACAACTACCACAAAGATGTCCCTGATGAGCAATGGGCAAGAACAACAGATTTCACTACGGGTTGTTGTATTGGGCAGTCCTCAGCCATATGTCTGGAGCTTCCTAGTGGCCAGAATTTGCCAAATTTCAAGGATATCTTTGCTTATTACGAGCAAAGTGAGGGGCAATACACATTACAGGCAGGAGTTCCCTTTTCTCAAAATGGGAGTCTTGTCCCCATTGTTGCTCCTCGAGGTGTTGAAATACCATTTGACATCTTGTTCAAAGTCAATTCATTGGTTCAGCACGTATGTCTAACTGGACCTGCACTCGATGATGACTTCTATCGCATGGTTGATCCGCGCAGAATTCCCCTTGATTTTATTGAAAATGCCTTGGAAAAAATGTACTACTCTAAGGAATTCTGTTATGATCCCACAAAGTGGTTGACTGAACAGTACAAAAGGTACCTTCAATCAAATTCAAAGAATGGTCCTCGGTCCCCTGCAATATCTTTGGATGCAGGGTTGGTGTATGTTCGCAGGGTTCAGATCACACCTTGCAAAGTTTACTTTTGTGGTCCAGAGATTAACGTCTCAAATCGTGTTCTCCGTCATTTCCATGAACATTTAGATAACTTTATACGTGTTTCATTTGTCGATGAGGAGTTGGATAAACTGTTTTCAACTGATCTATCATCACGTGCACAGAACAAGAAAACTGACTTGTACACGAGAATTCTTGACATCCTTAAAAATGGTATAATTATTGGCAATAAGAAGTTTGAATTTCTAGCATTTTCATCAAGTCAGTTGCGGGAAAACTCTCTATGGATGTTTGCTCCTACAGGGACTGGATGCACTGCCGAATACATACGGAAATGGATGGGAGATTTTAGCCAGATTAGGAATATTGCAAAATATTCTGCTAGGCTGGGACAATCTTTTGGTTCATCTACTGAAACTCTAAGCGTCCCTAGGCATGAAATTGGAATTATTCCGGATGTTAAGAGGACTTCTGGTGGAAAGGAATATGTCTTCTCTGATGGTATTGGGAAAATTTCTCTTGAATTTGCAAAGAAAGTGGCTAAAAAATGTGGCTATGATTGCACCCCATCTGCCTTTCAGATTCGTTACGGTGGTTACAAAGGAGTTGTAGCTGTTGATCCAACATCACATTATAATTTATCACTGAGGAATAGCATGCAGAAGTATGATTCAGATAACACGAAGTTAGATGTTTTGGGTCGTAGTAAGTTTCAGCCGTGTTATCTGAATCGACAGTTAATTACTCTGTTATCCACTCTTGGCATCAGGGATGATGTTTTTGAGAAAAAACAAAGAGAAGCTGTGGATCAACTGAACACTATACTAACAGATTCATTGAAGGCACAGGAAGTTCTGGACTTGATGTCTTCTGGGGAGATCACCAATGTTCTGAAGGAGATGCTCATTTGTGGCTACAAGCCTAATGAGGAACCATTCCTTTCAATGATGCTTCAAATATTTAGGGCGTCAAAACTGTTGGAATTAAGACTCAAGTCCAGGATCTTTATTCCGAAAGGAAGAGCAATGATGGGATGTCTAGATGAAACTTGTACCTTGGAATATGGTCAAGTATTTGTGCAGTTTTCTAGCAATAGGCTGCAGAATCTATCTGATGATACTGATTCCTATGATTTGCCAAAAAGTTATATGGTTAATGGTAAGGTGGTAGTAGCAAAAAACCCTTGCTTGCACCCTGGTGATGTGCGTGTTTTACAAGCTGTGGATGTGCCAGCTTTGTACCACATGGTGGACTGTGTAGTTTTCCCACAAAAAGGAAGAAGACCTCATCCAAATGAATGTTCGGGAAGTGATCTAGATGGAGATATCTACTTTGTTTGTTGGGACCCTGAGTTGATTCCTTCCCGCCAAATCCCACCAATGGACTATACTCCTTCCCCAACTACAGAGCTGCATAGATGTGTGACAATTGAGGATATTCAAGAGTACTTTACCAATTACATTGTGAATGACAGTCTGGGAATAATTGCCAATGCACACACTGTCTATGCTGACAGACAACCAGGAAAAGCCATGTCTGAAGAATGTCTTAAGCTTGCAACGCTGTTTTCAACAGCAGTCGACTTTCCAAAAACTGGTGTTCCAGCTGTTATTCCTCGTGAACTGTATGTCAAAGAATATCCTGACTTCATGGAGAAGTTTGACAAAGTCACCTATATATCGCCTAATGTAATAGGAAAGCTCTATAGGGAAGTTATGAAAACAATTTCATCAAGTGATGGTGGCTCTGTTTCATCCTTCACCCTAGAGGTCGCGAGAAGGTCTTATGACGCTGACATGGAAGTTGATGGCTTCATGGATTATGTTGATGATGCTTTCTATTACAAAACCAATTATGACTACAAGTTGGGAAATCTCATGGACTACTACGGCATCAAAACTGAAGCTGAAATCCTCAGCGGTAATATCATGAAACTGTCAAAATCCTTCAACAAAAGGAGGGATGCAGAATCAATCAATATGGCTGTGAGGTCCCTAAGGAAAGAGGCCCGGTCTTGGTTCAATGAGGGTAGCAATGGTGTGGATTCTGGAAGTGGTGATGATGCATATGCAAAAGCTTCTGCTTGGTACCATGTTACTTATCATCCTAGTTACTTGGGTTTGTACAACGAAGGAATGAAGAGGGATCATTATCTGAGTTTCCCATGGTGTGTTTACCCTCAGCTTCTCCAAATCAAGAAGGAGAAAGTCTCCAACAGAATGTACTCTTCGGCATACAGATTGAGTGGGTTGCATTTGAATGGATAA 3396 0.4072 MGKTIELYGFPIPVTAAQVKIFVENFTGEGTIQKLKVRHGKGRVPRAFAIIQFTTEEFATSMMSRANNVSRALRYGTAYLKARVMERDIEKISENVTSLEGVKLYFGCQISKGRFAVLERMQNVSLSFGSGKRKVELKFSRDFVQYKLQLSYENIWKVELLRPRDKTARYLLVQLLGAPRIFENDPFTCTDEYDNMFEDPLYNYHKDVPDEQWARTTDFTTGCCIGQSSAICLELPSGQNLPNFKDIFAYYEQSEGQYTLQAGVPFSQNGSLVPIVAPRGVEIPFDILFKVNSLVQHVCLTGPALDDDFYRMVDPRRIPLDFIENALEKMYYSKEFCYDPTKWLTEQYKRYLQSNSKNGPRSPAISLDAGLVYVRRVQITPCKVYFCGPEINVSNRVLRHFHEHLDNFIRVSFVDEELDKLFSTDLSSRAQNKKTDLYTRILDILKNGIIIGNKKFEFLAFSSSQLRENSLWMFAPTGTGCTAEYIRKWMGDFSQIRNIAKYSARLGQSFGSSTETLSVPRHEIGIIPDVKRTSGGKEYVFSDGIGKISLEFAKKVAKKCGYDCTPSAFQIRYGGYKGVVAVDPTSHYNLSLRNSMQKYDSDNTKLDVLGRSKFQPCYLNRQLITLLSTLGIRDDVFEKKQREAVDQLNTILTDSLKAQEVLDLMSSGEITNVLKEMLICGYKPNEEPFLSMMLQIFRASKLLELRLKSRIFIPKGRAMMGCLDETCTLEYGQVFVQFSSNRLQNLSDDTDSYDLPKSYMVNGKVVVAKNPCLHPGDVRVLQAVDVPALYHMVDCVVFPQKGRRPHPNECSGSDLDGDIYFVCWDPELIPSRQIPPMDYTPSPTTELHRCVTIEDIQEYFTNYIVNDSLGIIANAHTVYADRQPGKAMSEECLKLATLFSTAVDFPKTGVPAVIPRELYVKEYPDFMEKFDKVTYISPNVIGKLYREVMKTISSSDGGSVSSFTLEVARRSYDADMEVDGFMDYVDDAFYYKTNYDYKLGNLMDYYGIKTEAEILSGNIMKLSKSFNKRRDAESINMAVRSLRKEARSWFNEGSNGVDSGSGDDAYAKASAWYHVTYHPSYLGLYNEGMKRDHYLSFPWCVYPQLLQIKKEKVSNRMYSSAYRLSGLHLNG 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01765 1131 Pfam RNA dependent RNA polymerase 379 948 IPR007855 GO:0003968
Vian10g01765 1131 CDD RRM_SF 5 68 - -
Vian10g01765 1131 PANTHER RNA-DEPENDENT RNA POLYMERASE 3 1114 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01765 Vian-Chr10 29413258 29418765 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01765 10 29413258 29418765 Vian10g01765 10 29413258 29418765 ECH