Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01759 ATGGTCCGCTCTTATATTGAGAAGCCCAATTGCATTATATTGGCCATCTCTCCTGCAAACCAAGATATTGCTACTTCAGATGCAATAAAAATTTCAAGAGAAGTTGATCCTTCAGGTGAAAGAACATTTGGGGTGTTGACAAAACTTGATCTTATGGATAAAGGAACTAATGCAGTTGAGGTTCTCGAAGGAAGACAGTACAGGTTGCAGCATCCTTGGGTTGGAATTGTCAATCGTTCACAAGCTGATATTAATAAAAATGTTGACATGATTGTTGCTCGAAAGAAGGAGCGTGAATATTTCGAGAGTAGTCCCGAATATGGACATTTAGCACATAAAATGGGGGCAGAATATTTGGCCAGACTTCTATCCCAACATTTGGAGATTGTTATTAGGCAGAAGATACCCAGTATCATTGCCTTAATAAAGAAAGCCATTGACGAGCTTAATGCAGGGCTAGACCGAATTGGCAGGCCAATAGCTGTGGATTCAGGGGCGAAGCTATATACAATTTTACAGATGTGTCGAGCATTTGACAAAGTATTTAAAGAACACCTGGATGGAGGCCGTCCTGGTGGGGACCGGATATATGGTGTTTTTGACCACCAATTACCAGCTGCTTTAAAAAAGCTCCCATTTAATCGTCATCTTTCCGTAAAGAATGTTGAACGAGTAGTTACAGAAGCGGATGGTTATCAGCCACATCTAATTGCTCCAGAGCAAGGCTACAGAAGACTTATTGAAGGATCTATCGGCTATTTCAAAGGCCCAGCGGAAGCCTCTGTGGATGCTGTCCACCTAATTCTGAAGGAGCTTGTTCGGAAGTCAATTGCAGAAACTGAGGAATTGAAGAGGTTTCCCACCCTTCAAGCTGATATAGCTGCTTCTGCAAACGATTCTTTGGAACGATTCCGTGAAGAAAGTAGGAGGACTGTGATCCGGATGGTGGATATGGAGTCTGGCTATCTAACAGTGGAATTTTTTCGGAAGATGCATCTTGAACCAGAAAAAAGTTCAGATCCAAAGAACCCAAATCGAAGTACTCCTAATCCCAATGTGGATACTCACTCAGATAGTCACCTCAGTAAAATTGGGTCAAATGTTAATGGTTATATCAACATGGTTTGTGATTCACTAAAACATTCTATTCCGAAAGCGGTGGTTCATTGTCAAGTTAGAGAGGCAAAGAGATCATTGCTAAACCAATTTTATGTTCAAGTTGGGAAAAGGGAGAAGGATCAATTGGGGGCGTTGTTGGATGAAGACCCAGCACTTATGGAAAAGAGATCACAACTAGCTAAAAGGCTTGAATTGTACAAGCAAGCTATGGATGATATTGATTCTGTGGCTTGGAAATAA 1359 0.4135 MVRSYIEKPNCIILAISPANQDIATSDAIKISREVDPSGERTFGVLTKLDLMDKGTNAVEVLEGRQYRLQHPWVGIVNRSQADINKNVDMIVARKKEREYFESSPEYGHLAHKMGAEYLARLLSQHLEIVIRQKIPSIIALIKKAIDELNAGLDRIGRPIAVDSGAKLYTILQMCRAFDKVFKEHLDGGRPGGDRIYGVFDHQLPAALKKLPFNRHLSVKNVERVVTEADGYQPHLIAPEQGYRRLIEGSIGYFKGPAEASVDAVHLILKELVRKSIAETEELKRFPTLQADIAASANDSLERFREESRRTVIRMVDMESGYLTVEFFRKMHLEPEKSSDPKNPNRSTPNPNVDTHSDSHLSKIGSNVNGYINMVCDSLKHSIPKAVVHCQVREAKRSLLNQFYVQVGKREKDQLGALLDEDPALMEKRSQLAKRLELYKQAMDDIDSVAWK 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01759 452 ProSiteProfiles GED domain profile. 361 452 IPR020850 -
Vian10g01759 452 MobiDBLite consensus disorder prediction 342 360 - -
Vian10g01759 452 SMART GED_2 356 449 IPR003130 GO:0003924|GO:0005525
Vian10g01759 452 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 1 136 IPR030381 GO:0005525
Vian10g01759 452 FunFam Dynamin-related protein 1C 167 429 - -
Vian10g01759 452 Pfam Dynamin GTPase effector domain 357 449 IPR003130 GO:0003924|GO:0005525
Vian10g01759 452 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 145 IPR027417 -
Vian10g01759 452 Pfam Dynamin family 1 48 IPR045063 -
Vian10g01759 452 Gene3D - 1 145 IPR027417 -
Vian10g01759 452 Pfam Dynamin central region 57 324 IPR000375 -
Vian10g01759 452 PRINTS Dynamin signature 37 53 IPR022812 -
Vian10g01759 452 PRINTS Dynamin signature 18 36 IPR022812 -
Vian10g01759 452 PRINTS Dynamin signature 60 79 IPR022812 -
Vian10g01759 452 Gene3D Dynamin, middle domain 167 429 - -
Vian10g01759 452 MobiDBLite consensus disorder prediction 334 360 - -
Vian10g01759 452 PANTHER DYNAMIN 1 449 IPR022812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01759 Vian-Chr10 29316899 29325438 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01759 10 29316899 29325438 Vian10g01759 10 29316899 29325438 ECH