Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01643 ATGGCCGAAGCTCTCTCGGTGATTCCGCCCGCCGTGCTTCGTAACCTCGCCGACAAGCTCTACGAGAAGCGCAAGAATGCAGCACTGGAGGTTGAGGGGATAGTGAAGCAGCTTGCTTCTGCTGGGGATCATGATAGGATAGTTGCTGTGATCAGTTTGTTGACTACTGAATTCACTTGTTCGCCCCAGGCAAATCACCGTAAGGGAGGGTTGATAAGCTTAGCTGCTGCCACTGTTGGGTTGACAATTGAAGCTGTTCAGCATCTCGAGCTAATTGTACCTCCTGTATTGAATTCCTTTGCCGATCAAGATAGCAGAGTTCGTTATTATGCTTGTGAAGCATTATACAACATAGCAAAGGTTGTGAGAGGAGATTTTATTATATTCTTCAACCAGATCTTTGATGCCTTATGCAAGCTTTCTGCAGACTCAGATGCCAATGTACAAAGTGCTGCACATCTCTTAGACCGACTTGTAAAGGATATTGTGACTGAAAGTGATCAGTTCAGTATTGAAGAATTTATACCATTGCTGAGGGAGCGCATGAATGTTTTGAATCCATATGTTCGTCAGTTTTTGGTTGGATGGATTACTGTCTTGGACAGTGTCCCAGATATTGACATGCTGGGCTTTCTTCCTGATTTTCTTGATGGTTTGTTTAATATGCTGAGTGATTCAAGTCATGAAATACGTCAGCAGGCTGATTCAGCTCTTTCGGAGTTTCTTCAAGAGATTAAAAATTCACCATCTGTAGATTATGGTCGAATGGCTGAAATACTGGTACAAAGGGCAGGTTCTCCAGATGAATTTACTAGGTTAACAGCTATCACGTGGATAAATGAGTTTGTTAAACTTGGTGGAGATCAGCTTGTTCCATATTATGCTGACATTCTTGGAGCCATTTTGCCGTGCATATCTGATAAAGAAGAGAAAATTAGAGTGGTTGCTCGTGAAACCAATGAAGAGCTACGTGGAATCAAGGCTGATCCAGCTGACACATTTGATGTAGGAGCAATCCTGTCCATTGCTAGGAGGCAACTATCTAGTGAATGGGAGGCTACTCGAATTGAAGCTTTGCACTGGATGTCGACCCTTTTATCCAGACACCGTAGTGAGGTTTTGATATTTCTGAATGACATATTTGATACCCTACTCAAAGCACTTTCAGATTCTTCTGATAAGGTTGTGCTTCTAGTTCTTGATGTTCATGCATGCATTGCAAGAGATCCCCTCCATTTCCGGCAGCTTGTTGCTTTTCTAGTGCACAGTTTCCAACTAGATAATTCCCTTTTGGAGAAGCGAGGTGCTTTGATAATTCGTCGCCTTTGTGTTCTTTTGAATGCTGAGAGAGTCTACCGGGAACTTTCTGCAATATTAGAAGGAGAATCTGATTTGGAATTTGCATCAATTATGGTTCAGGCTTTGAATTTGATCTTACTTACATCATCAGAATTATCTGAGATTCGAGATCTTTTGAAGCAATCACTTGTAACTCCTTCCGGGAAGGACCTATATGATGCTCTGTATGCCTCCTGGTGTCATTCTCCAATGGCAATTATAAGTCTATGCTTTTTAGCTCAGACCTACCAACATGCCAGTACTGTGATTCAGTCACTGGTGGAGGAGGATATTAATGTCAAACTTTTGGTCCAACTGGATAAATTGATCCGCTTGATGGAAACTCCTATCTTTGCCTATCTTCGATTGCAGCTTCTTGAACCTGGAAGATATATTTGGTTATTCAAGGCATTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCCGCCTTTAAGATACTAAAAACTCGTTTGAAAGCTGTGCCTTCGTATTCAAATAGTGGTGAGCAATTGAAGAGAACATCTTCTGGGGATCCCTACCAATTTCATAGCGTGCCTGATGGATTTCGAACCATTGAGGATGGTGTTGTTGTAGCCGAAGATGGTGGGAGCTCACGTAATGGAATAAATTTTGCTGCAAGGCTACAACAATTTCAGCAAATGCAGCGCCAGCATCGTGTGCTTGCCAAAACACGGGCAAAGTCACGCAATATTTCCACTTCATCGACAAAGGAGCCAAAAAGAGAGGAAGAACCAATAAGAGCCCAGTCTGTTGAACGTAATGTTCCTTCAAGATCATTTAAGAGAGGTCTAGGGAAGCTACGCTTATAA 2172 0.424 MAEALSVIPPAVLRNLADKLYEKRKNAALEVEGIVKQLASAGDHDRIVAVISLLTTEFTCSPQANHRKGGLISLAAATVGLTIEAVQHLELIVPPVLNSFADQDSRVRYYACEALYNIAKVVRGDFIIFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVARETNEELRGIKADPADTFDVGAILSIARRQLSSEWEATRIEALHWMSTLLSRHRSEVLIFLNDIFDTLLKALSDSSDKVVLLVLDVHACIARDPLHFRQLVAFLVHSFQLDNSLLEKRGALIIRRLCVLLNAERVYRELSAILEGESDLEFASIMVQALNLILLTSSELSEIRDLLKQSLVTPSGKDLYDALYASWCHSPMAIISLCFLAQTYQHASTVIQSLVEEDINVKLLVQLDKLIRLMETPIFAYLRLQLLEPGRYIWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSNSGEQLKRTSSGDPYQFHSVPDGFRTIEDGVVVAEDGGSSRNGINFAARLQQFQQMQRQHRVLAKTRAKSRNISTSSTKEPKREEEPIRAQSVERNVPSRSFKRGLGKLRL 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01643 723 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Vian10g01643 723 PANTHER TAX1 BINDING PROTEIN-RELATED 7 688 IPR026825 GO:0006661|GO:0070772
Vian10g01643 723 FunFam protein VAC14 homolog 126 248 - -
Vian10g01643 723 SUPERFAMILY ARM repeat 3 542 IPR016024 -
Vian10g01643 723 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Vian10g01643 723 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Vian10g01643 723 MobiDBLite consensus disorder prediction 675 723 - -
Vian10g01643 723 FunFam protein VAC14 homolog isoform X1 249 410 - -
Vian10g01643 723 FunFam ARM repeat superfamily protein 6 125 - -
Vian10g01643 723 MobiDBLite consensus disorder prediction 688 703 - -
Vian10g01643 723 Gene3D - 215 479 IPR011989 -
Vian10g01643 723 Gene3D - 3 207 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01643 Vian-Chr10 27527732 27540305 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01643 10 27527732 27540305 Vian10g01643 10 27527732 27540305 ECH