Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01636 ATGGGTTCTGAAGGATCCAGCGTCGTCGTTCCTAGGAATTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAAAAGGGAATCGGGGATGGAACTGTTAGCTATGGAATGGATGATGCTGATGACATATACATGCAGTCTTGGACAGGGACTATTATTGGCCCTCCTGGTACTGTTCATGAAGGACGAATCTACCAGTTGAAATTGTTTTGTGGCAAGGATTATCCAGACAATCCTCCATCTGTTCGATTTCAAACAAGGATTAACATGACATGTGTCAATCAAGAAAGTGGAGTGGTTGAGCCACATTTGTTTCCTATGCTTGCCTATTGGAAACGTGAGCGAACAATGGAAGACATTTTGTTGCAATTGAAGAAAGAAATGATGTCAGCCCAAAATCGGAAGCTAACTCAGCCTCCTGAAGGTAATGAAGAAGCTAGAATTGATCAAAAGGGTCTGGTGGTGAGATGTTGTATTGTGTAA 480 0.4229 MGSEGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPGTVHEGRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNQESGVVEPHLFPMLAYWKRERTMEDILLQLKKEMMSAQNRKLTQPPEGNEEARIDQKGLVVRCCIV 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01636 159 SMART ubc_7 14 158 - -
Vian10g01636 159 Pfam Ubiquitin-conjugating enzyme 41 132 IPR000608 -
Vian10g01636 159 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 11 159 IPR000608 -
Vian10g01636 159 FunFam Ubiquitin-conjugating enzyme E2 variant 1C 2 144 - -
Vian10g01636 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 44 135 - -
Vian10g01636 159 SUPERFAMILY UBC-like 9 142 IPR016135 -
Vian10g01636 159 Gene3D Ubiquitin Conjugating Enzyme 2 144 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01636 Vian-Chr10 27450664 27454948 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01636 10 27450664 27454948 Vian10g01636 10 27450664 27454948 ECH