Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02052 ATGATAAAGGAATTCAAAACCCAAACAACACTCAATGTAGGGTTGGAGACCCTCTGGGCAGCTCAATCCAAAGATTTCATGCTCATTGCTCCAAAGGTTCTACCAAATATTGTCAAAGATGTGCAGCTAATTGAAGGCGATGGAGGAGTTGGTACAGTCCTCATCTTTAATTTTTTGCCTGGCATATCCCCAGTAAATTATCAAAGGGAGCTGATCACTGAGTTTGATGAGGTATCCCATGAAATTGGACTTCAAGTGGTTGAAGGAGGCTATCTGAATCAAGGTTTGTCATACTACAAAacaacttttcaattttcagcAATAACAGAGAACAAGACTTTAGTCAACGTGAAGATCTCTTATGATCATGAATCCGACATAGATGAAAAAGTCAAACCTACAAAGACATCACAGTCCACTCTATTCTATCTTGGGCGCCTAGAAAACTATCTCTTGAATCATGCTTGA 468 0.3803 MIKEFKTQTTLNVGLETLWAAQSKDFMLIAPKVLPNIVKDVQLIEGDGGVGTVLIFNFLPGISPVNYQRELITEFDEVSHEIGLQVVEGGYLNQGLSYYKTTFQFSAITENKTLVNVKISYDHESDIDEKVKPTKTSQSTLFYLGRLENYLLNHA 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02052 155 PRINTS Major pollen allergen Bet V1 signature 2 22 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu08g02052 155 PRINTS Major pollen allergen Bet V1 signature 25 35 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu08g02052 155 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu08g02052 155 PRINTS Major pollen allergen Bet V1 signature 85 98 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu08g02052 155 PRINTS Major pollen allergen Bet V1 signature 143 153 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu08g02052 155 Pfam Pathogenesis-related protein Bet v 1 family 5 153 IPR000916 GO:0006952
Tsu08g02052 155 CDD Bet_v1-like 3 151 - -
Tsu08g02052 155 PANTHER PHYTOHORMONE-BINDING PROTEIN 3 155 - -
Tsu08g02052 155 PANTHER - 3 155 - -
Tsu08g02052 155 Gene3D - 1 155 IPR023393 -
Tsu08g02052 155 SUPERFAMILY Bet v1-like 4 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02052 Tsu-Chr8 27238280 27239489 Dispersed/Tandem