Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01350 atgAGGGTCTGGAAACTTGCAACAGGGGTTATCAAAGACAAGAACAGCATTTGGGCTGCAAGATTTTCAAGAAAGGGTCCATGGCGTAATCCTGATCTTGAAACTGTTATAATCAAAGCTACAAGCCATGACGAAAATCGCATCGATTGTAAGAATGTGCAAAGAGTTTTTAAATGGCTAAGAACATCTCCTTTGTATTTGAAACCATTGGTTTGGGCTTTATCCATAAGAATGCAAAAAACTAAGAGTTGGGTTGTGGCTCTTAAAGGATTAATGCTCATTCATGGAGTTTTCTGCATTGGTCTTCCTGTGGTACAAAAAATGGGTAGGTTACCATTTGATTTATCAAATTTCAATGATGGTTATTTGAAGGATTCAAAAGCTTATGGTTATAATGCTTTTGTGCGGTCTTATTTTGCTTATTTGGATAAAAGATCGGTTTTCGTTTCCTCCGAGGTtaagaatttgaagaagaataaTAAGGAGGGGGAAGTTGAAGAGACATTGATGGAAGAGCTTGAGAAGTTGCAAAAGTTACAAGAAATGATTGATAtgcttttgcaaatcaaaccaaggaatgtgaatatgaatgttgGTCTTATTCTTGAAGCAATGGATTGTATCATAGTTGAGATTTTTGATGTTTATAGTAAATTTTGTAACAAGATTGCAAAGGTGTTGATGAGGATTTATGATGTCGGTGCGAAAATGGAATCTTGTGCTATGCTAAAGATTTTGCAAAGAGCAGTTACTCAAGGAGATGAATTGGCTTGTTATATTGAGTTTTGTAGGGATATTGGTGTACTTAATGCTTCTCAATGTCCTAAGATTGAAAGAATTTCTGATGAAGATATTCAAGATCTTGAGAAGATAATTAAGGGTGCTTTAAATGATAACAAAAGCTTGGAGGGTGTTAATGAGAATCAAGACAAGGCCATTGTGGTAAGAGATAGCTTGCATCGCAAGGAATTGTCACAGAATGGTTTAACAACAGTGATTACTCATCAATGGGAGGTGTTTTTTGATGACATAATGGTTAATGATGTGAAAGGAAATGGTATCATCAATGGTGACAAGGGTAGTATTGTAATAACTACCAACCCCTTTGAGGAATCATATAGCATTGTACCTTATTGTCATGTCAACATTAATCAATCTCTTCCAGACCTAATTAGTTTGTAG 1182 0.3384 MRVWKLATGVIKDKNSIWAARFSRKGPWRNPDLETVIIKATSHDENRIDCKNVQRVFKWLRTSPLYLKPLVWALSIRMQKTKSWVVALKGLMLIHGVFCIGLPVVQKMGRLPFDLSNFNDGYLKDSKAYGYNAFVRSYFAYLDKRSVFVSSEVKNLKKNNKEGEVEETLMEELEKLQKLQEMIDMLLQIKPRNVNMNVGLILEAMDCIIVEIFDVYSKFCNKIAKVLMRIYDVGAKMESCAMLKILQRAVTQGDELACYIEFCRDIGVLNASQCPKIERISDEDIQDLEKIIKGALNDNKSLEGVNENQDKAIVVRDSLHRKELSQNGLTTVITHQWEVFFDDIMVNDVKGNGIINGDKGSIVITTNPFEESYSIVPYCHVNINQSLPDLISL 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01350 393 CDD ANTH_N_AP180_plant 33 148 - -
Tsu02g01350 393 Pfam ANTH domain 32 293 IPR011417 GO:0005543
Tsu02g01350 393 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Tsu02g01350 393 SMART enth_2 31 160 IPR013809 -
Tsu02g01350 393 SUPERFAMILY GAT-like domain 171 294 - -
Tsu02g01350 393 Gene3D ANTH domain 155 311 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Tsu02g01350 393 Coils Coil 285 305 - -
Tsu02g01350 393 Gene3D - 5 152 IPR008942 -
Tsu02g01350 393 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 361 IPR045192 GO:0048268|GO:0072583
Tsu02g01350 393 SUPERFAMILY ENTH/VHS domain 32 149 IPR008942 -
Tsu02g01350 393 Coils Coil 162 189 - -
Tsu02g01350 393 PANTHER OS08G0467300 PROTEIN 1 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01350 Tsu-Chr2 11723864 11725146 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01350 02 11723864 11725146 Tsu02g01350 02 11723864 11725146 ECH