Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01334 ATGTGGCCTACGTTAGTAGCTAATAAGATACTCAAGAAGCGATTAGGAAGTACTAATTTTATAGCAGATTATCCTAGTTATGATGAACCTTTGTTGGGTTTTGCAGACATTGATCATAGTCTTGAAACAATTCCTAATCATCAAAAGGAAAACCACAAATACAAGATTTTTGTTAGTACATGGAACATAGGTGGGATTGCACCAGAAGAAGATTTAAATATTCATGATTTGTTGGAGACAAACAAGAACTTATGTGACATCTATGTACTTGGGTTTCAAGAAATAGTGCCACTAAAAGCTTCAAATGTATTAGGATCAGAAAACAATGAGGTTTCCAAGAAATGGAATTCAATAATAAGAAAAGCTTTGAACAAGGATGAGAAAGACAAAGTTCATAGTGAATCTTCACATGACGATTTCCAATGTATAATTAGCAAGCAAATGGTTGGAATATTCATATCTGTGTGGATAAGAAGAGATATTCGTCCATTCATTCAACATCCAAATGTATCATGCATAGGTTGTGGCATATTAGGATGTTTAGGAAACAAGGGGTCTGTATCAGTGAGATTTCAATTGCATGAAACAAGCTTTTGCTTTGTGTGTAGCCATCTAGCTTCAGGAGGCAAAGAAGGAGATGAAAAGTGTAGAAATTCAAATGTTGCTGAAATTTTTTCTAGGACTAGCTTTCCTAGAGGTCCTTTGTTTGATTTACCAAGAACTATTCTAGATCATGATCATGTAATATTGCTTGGAGATTTAAATTATAGAATATCTCTACCAGAAGAAACGACACGGTTACTTGTTGAGAAAAGGGACTGGGATTCCTTATTAGAAAATGACCAGCTAATGATGGAGTTAATGAATGGCAACAATTTAAGAGGATGGCATGAAGGACCAATCAAATTTGCACCTACCTACAAATATTGTCCAAATTCAGACATATATTATGGATGCTGTTGTCATggaaaaaagatagaaaaaagGCGAGCACCAGCATGGTGTGATCGAATAGTATGGTATGGAAAGGGTTTAAAGCAACATGAGTACACAAGGAGTGAATCAAGACTATCAGATCATAGGCCTGTTAAGGCAATTTTTACTGCAGTAATAAAGGTTTCATCAGAATTCAAAAGCATACAAAGATTGTCTCTATCAGCAAGATTTGAGCAAATTAAAACTCCTTTTGAAGTTTCTACTACTGATGAAATTATATGTAGAAAACAACCAAGTTTCCATTTGTAA 1245 0.3414 MWPTLVANKILKKRLGSTNFIADYPSYDEPLLGFADIDHSLETIPNHQKENHKYKIFVSTWNIGGIAPEEDLNIHDLLETNKNLCDIYVLGFQEIVPLKASNVLGSENNEVSKKWNSIIRKALNKDEKDKVHSESSHDDFQCIISKQMVGIFISVWIRRDIRPFIQHPNVSCIGCGILGCLGNKGSVSVRFQLHETSFCFVCSHLASGGKEGDEKCRNSNVAEIFSRTSFPRGPLFDLPRTILDHDHVILLGDLNYRISLPEETTRLLVEKRDWDSLLENDQLMMELMNGNNLRGWHEGPIKFAPTYKYCPNSDIYYGCCCHGKKIEKRRAPAWCDRIVWYGKGLKQHEYTRSESRLSDHRPVKAIFTAVIKVSSEFKSIQRLSLSARFEQIKTPFEVSTTDEIICRKQPSFHL 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01334 414 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 5 390 - -
Tsu02g01334 414 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 5 390 IPR045849 GO:0004445|GO:0046855
Tsu02g01334 414 Gene3D Endonuclease/exonuclease/phosphatase 35 393 IPR036691 -
Tsu02g01334 414 SUPERFAMILY DNase I-like 50 372 IPR036691 -
Tsu02g01334 414 Pfam Endonuclease/Exonuclease/phosphatase family 60 360 IPR005135 GO:0003824
Tsu02g01334 414 SMART i5p_5 52 375 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01334 Tsu-Chr2 11624672 11628239 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01334 55 411 Acyl Lipid Metabolism Gene Families AT1G65580 26.969 2.41e-35 136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01334 02 11624672 11628239 Tsu02g01334 02 11624672 11628239 ECH