Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00131 ATGGTtgctctgttttttcttttcttagtCACACTCTTAACATCTTCAACCTCATCAATCTCCGACACTAACTCATTTATCTTCGGTGGTTGTTCTCGTCTCAAATACTCGCCGGGTTCAGCTTATGAAACAAGCGTTAACTCGGTCCTAACTTCGCTAGTTGACTCAGCATCCTTCACTACATACAACAAATTCACCGGCACCGCCGCGTCGGAAACTGTCTATGGTCTTTTTCAGTGTCGTGGAGATTTAAACAATGATCAGTGTTCAAGCTGTGTAGCGCGTGCAGTGAGTCAACTCGGTACACTCTGTTTCGCTACTTACGGTGGCGCGTTACAGCTTGAAGGATGTTTCGTAAAATACGATAATGTTTCATTTTTTGGGGTAGAGGATAAAACAGAAGTGATCAAGAAATGTGGACCGTCGATTGGGTTGACTTCTGATGCGTTTACTCGAAGGGATGGTGTGCTGGCTTATTTACAATCGTCCGATGggaataataaaaatttcatgaCAAATTCGGTTGGGGATTTTCGGGGTGTGGCGCAGTGTACGGGAGATTTGAGTACCAGCAAGTGTCAGGATTGTGTTTCGGAAGCAATCCAACGGTTGAAAAGTGAGTGTGGAGCATCCACGTGGGGTGATATGTATTTGGCTAAGTGCTACGTGCGTTATTCGGAAGGTGGAGATCACTCGCGAGGTAGTAATGATGATGAGAATCACAATGATGATGAAATTGAGAAGACATTAGCCATACTAATTGGACTCATTGCTGGTGTTGCTCTAATCATAGTTTTCCTTTCCTTCTTGAATAAGGTCTGCGACAAGCAGAGAGGTGGTAAATAA 846 0.4232 MVALFFLFLVTLLTSSTSSISDTNSFIFGGCSRLKYSPGSAYETSVNSVLTSLVDSASFTTYNKFTGTAASETVYGLFQCRGDLNNDQCSSCVARAVSQLGTLCFATYGGALQLEGCFVKYDNVSFFGVEDKTEVIKKCGPSIGLTSDAFTRRDGVLAYLQSSDGNNKNFMTNSVGDFRGVAQCTGDLSTSKCQDCVSEAIQRLKSECGASTWGDMYLAKCYVRYSEGGDHSRGSNDDENHNDDEIEKTLAILIGLIAGVALIIVFLSFLNKVCDKQRGGK 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00131 281 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 4 278 - -
Tsu02g00131 281 Pfam Salt stress response/antifungal 31 123 IPR002902 -
Tsu02g00131 281 Pfam Salt stress response/antifungal 157 227 IPR002902 -
Tsu02g00131 281 Gene3D - 147 228 IPR038408 -
Tsu02g00131 281 Gene3D - 22 126 IPR038408 -
Tsu02g00131 281 ProSiteProfiles Gnk2-homologous domain profile. 24 126 IPR002902 -
Tsu02g00131 281 PANTHER PLASMODESMATA-LOCATED PROTEIN 6 4 278 - -
Tsu02g00131 281 ProSiteProfiles Gnk2-homologous domain profile. 131 230 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00131 Tsu-Chr2 936575 939021 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00131 12 225 Pollen Coat Proteome AT4G20670 28.571 4.48e-20 85.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00131 02 936575 939021 Tsu02g00131 02 936575 939021 ECH