Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00130 ATGGGTTCTGAAGGTTCCACCGTCGTTGTTCCTAGGAATTTCAGATTATTGGAAGAGCTTGAACGAGGTGAGAAGGGAATTGGAGATGGAACTGTTAGCTATGGAATGGATGATGCTGATGATATATACATGCAGTCATGGACTGGAACTATTATTGGCCCCCCCGGTACTGTTCATGAAGGTCGTATCTACCAGTTGAAATTGTTTTGTGGCAAGGATTATCCAGACAATCCACCATCTGTTAGATTTCAGACAAGGATTAACATGACTTGTATTAACCAAGAATCTGGAGTGGTTGAGCCGCATTTATTTCCAATGCTTGCTAATTGGAAAAGAGAGACTACAATGGAAGACATTTTATTGCAATTGAAGAAAGAAATGATGTCTCCACAAAACCGGAAGCTAGCTCAGCCTCCTGAAGGTAATGAAGATGGAAGGATTGACCAAAAGGGCTTGGTGCTGAGATGTTGTATTGTGTAA 480 0.4146 MGSEGSTVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPGTVHEGRIYQLKLFCGKDYPDNPPSVRFQTRINMTCINQESGVVEPHLFPMLANWKRETTMEDILLQLKKEMMSPQNRKLAQPPEGNEDGRIDQKGLVLRCCIV 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00130 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 8 144 - -
Tsu02g00130 159 SMART ubc_7 14 158 - -
Tsu02g00130 159 Gene3D Ubiquitin Conjugating Enzyme 2 144 IPR016135 -
Tsu02g00130 159 SUPERFAMILY UBC-like 8 142 IPR016135 -
Tsu02g00130 159 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 11 159 IPR000608 -
Tsu02g00130 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1A-LIKE 8 144 - -
Tsu02g00130 159 Pfam Ubiquitin-conjugating enzyme 41 135 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00130 Tsu-Chr2 924456 928687 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00130 02 924456 928687 Tsu02g00130 02 924456 928687 ECH