Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00114 ATGTTTATAGTTAGGAAAAATGGAAAAACTGCACTACACAATGCTGTTAGGTATGGCGTCCTTCGCATTGTGAAAACACTTATCTCCCGTGATCAAGGAATAGTCTgtatcaaagataaaaaaggTCAAACTGCATTGCATATGGCTGTTAAAGGACAGAGTACATCAGTGGTGGAGGAGATATTGCAAGCTGATCCTACAATATTGAATGAACGAGATAAGAAGGGTAATACCGCTCTTCACATGGCTACGAGGAAAGGCCGGTCGCAGATAGTGAGCCTTTTGCTAAGCTACTCAGCTGTGGATGTTAATGCCATCAATAAGCAACAAGAAACAGCCTTGGATTTGGCAGATAAACTTCCATACGGATCTTCAGCTTTAGAAATCCAAGAAGCACTTTCAGAGTATGGTGCTAAATATGCAAGACATGTTGGCAAAGTAGATGAAGCCATGGAACTTAAAAGAACTGTGAGTGATATAAAGCATGAGGTGCAGTCACAACtcatacaaaatgaaaaaactcgCCGACGAGTTTCTGGTATAGCTAAGGAATTGAAGAAACTTCATAGAGAAGCCGTTCAAAACACCATTAACTCTGTCACAGTTGTCGCTGTCCTTTTCGCCTCGATAGCTTTCTTGGCTATATTCAATTTGCCGGGTCAATATATTATGGAAGGACCACAGGCAGGAAAATCTAACATAGCTGATCATGTTGGATTCCAAATTTTCTGTCTCTTGAATTCGACGTCTCTTTTCATTTCTCTTGCAGTTGTTGTTGTTCAAATCACTTTGGTTGCTTGGGACACAAGGGCTCAAAGACAGATTGTGTCGGTCGTTAACAAGCTAATGTGGGCTGCTTGTGCTTGCACATGCGGCGCTTTTCTCGCAATAGCTTTTGAGGTTGTTGGGAAGAAAAAATGGATGGCTATTACCATAACTGGTTTGGGCATACCAATTCTAGTTGGAACTCTTGCAAGTATGTGTTACTTTGTTTTTCGACAACACTTTGGCATTTTCCAAAGTGATTCCCAGAGACGCATCAAGAGAGCGAGTGGAAGCAAATCTTTCTCGTGGTCTTACTCTGCAAATATATCAGATTTGGACGAATACAATTCGGACATTGAGAAGATCTATGCCCTGTAG 1143 0.4016 MFIVRKNGKTALHNAVRYGVLRIVKTLISRDQGIVCIKDKKGQTALHMAVKGQSTSVVEEILQADPTILNERDKKGNTALHMATRKGRSQIVSLLLSYSAVDVNAINKQQETALDLADKLPYGSSALEIQEALSEYGAKYARHVGKVDEAMELKRTVSDIKHEVQSQLIQNEKTRRRVSGIAKELKKLHREAVQNTINSVTVVAVLFASIAFLAIFNLPGQYIMEGPQAGKSNIADHVGFQIFCLLNSTSLFISLAVVVVQITLVAWDTRAQRQIVSVVNKLMWAACACTCGAFLAIAFEVVGKKKWMAITITGLGIPILVGTLASMCYFVFRQHFGIFQSDSQRRIKRASGSKSFSWSYSANISDLDEYNSDIEKIYAL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00114 380 ProSiteProfiles Ankyrin repeat region circular profile. 7 30 - -
Tsu02g00114 380 Pfam Domain of unknown function 191 298 IPR026961 -
Tsu02g00114 380 PANTHER ANKYRIN REPEAT PLANT-LIKE PROTEIN 1 380 - -
Tsu02g00114 380 Pfam Ankyrin repeats (3 copies) 7 68 IPR002110 GO:0005515
Tsu02g00114 380 ProSiteProfiles Ankyrin repeat region circular profile. 75 100 - -
Tsu02g00114 380 SMART ANK_2a 41 70 IPR002110 GO:0005515
Tsu02g00114 380 SMART ANK_2a 7 36 IPR002110 GO:0005515
Tsu02g00114 380 SMART ANK_2a 75 105 IPR002110 GO:0005515
Tsu02g00114 380 Coils Coil 171 191 - -
Tsu02g00114 380 SUPERFAMILY Ankyrin repeat 5 120 IPR036770 -
Tsu02g00114 380 ProSiteProfiles Ankyrin repeat profile. 75 100 IPR002110 GO:0005515
Tsu02g00114 380 Pfam Ankyrin repeat 76 107 IPR002110 GO:0005515
Tsu02g00114 380 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 1 380 - -
Tsu02g00114 380 ProSiteProfiles Ankyrin repeat profile. 7 30 IPR002110 GO:0005515
Tsu02g00114 380 Gene3D - 2 160 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00114 Tsu-Chr2 831135 833589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00114 2 380 Miscellaneous Gene Families AT2G01680 74.474 0.0 551
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00114 02 831135 833589 Tsu02g00114 02 831135 833589 ECH