Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00113 ATGGCCGACGCTCTGTCGTCTATTCCGGCAGCCGTTCTTCGTAACCTTGCTGATAAGCTCTATGAGAAACGCAAAAATGCTGCTCTTGAGATTGAGAATATAGTGAAGCAATTAGCTGCTAATGGAGATCATGATAAAATTAAGGCTGTTATCAATTTGTTGACTACTGAATTTATTAATTCACCACAAGCTAATCATCGGAAGGGAGGATTGATAGGATTAGCTGCTGCAACTGTTGGGTTGACTTCTGAAACAGCTCAGCATCTTGAGAATATTGTGCTCCCTGTGCTAAGTTCTTTCTCTGATCAAGAAAGCAGAGTTCGTTATTATGCCTGTGAAGCACTATATAACATAGCTAAGGTTGTGAGAGGGGACTTTATTGTATTCTTCAACAAGATTTTTGATGCCTTATGCAAGCTTTCCGCGGACTCTGATGGAAATGTACAAAGTGCTGCTCACCTATTAGATCGTCTTGTGAAGGATATTGTGACTGAAAGTGATCAGTTCAGTATTGAAGAATTTATACCACTGTTAAGGGAGCGCATGAATGTATTGAATCCATATGTCCGCCAGTTTTTGGTAGGATGGATTACTGTATTGGACAGTGTCCCAGATATTGATATGCTAGGTTTCCTTCCTGATTTTCTTGATGGATTGTTTAACATGTTAAGTGATTCGAGTCATGAAATACGTCAACAGGCTGATTCAGCTCTTTCAGAGTTTCTTCAAGAAATTAAGAACTCACCATCTGTAGATTATGGTCGAATGGCTGAAATACTGGTACAGAGGGCAGGTTCTCCAGACGAATTTACGAGGCTAACAGCTATCACATGGATAAATGAGTTTGTCAAACTTGGTGGAGACCAGCTTGTTCCATATTATGCATCCATTCTTGGAGCCATTTTGCCCTGTATATCAGATAAAGAAGAGAAAATCAGAGTTGTTGCTCGTGAAACCAATGAAGAGCTACGTGCCATCAAGGCTGATCCAGCTGAAGCATTTGATGTAGGAGCAATCCTCTCCATTGCCAGGAGGCAAATATCTAGTGAATGGGAGGCTACTCGAATTGAAGCTTTGCACTGGATATCAACCCTTGTAAATGAATATCGCACCGAGGTTTTGCAATATCTGAACGACATATTCGACACCCTGCTCAAGGCACTTTCAGATCCATCTGATGAGGTTGTTCTTCTAGTTCTTGAAGTTCATGCGTACATTGCGAAAGATCCTCAGCACTTCCGTCAGCTTGTTGTTTTCCTGATGCACAATTTCCGGACAGACAATACACTTTTGGAGAAGCGTGGTGCTTTAATAATCCGTCGGCTCTGTGTGCTTTTGGATGCTGAGAGAGTCTACCGTGAACTTTCTACAATACTAGAAGGGGAATCTGATTTGGATTTTGCATCAATTATGGTTCAGGCTTTGAATTTGATCTTACTTACATCATCAGAACTATCTGAGATTAGAGTTCTTTTGAAGCAATCATTGGTAAATCCTGCCGGGAAggatttatttgtttctttgtatGCCTCATGGTGTCATTCTCCAATGGCGATTATCAGTCTTTGCTTCTTAGCTCAGACTTACCAACATGCGAGTACTGTGATTCAATCTCTGGTAGAGGAGGATATTAATGTCAAGTTTTTAGTACAACTGGATAAATTGattcgtttgctggaaactccGGTCTTTGCTTATCTAAGATTGCAGcTTCTGGAGCCTGGAAGATATACATGGTTATTTAAAGCACTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCTGCCTTCAAGATACTAAAAACTCGTTTGAAAGCCGTGCCATCGTATTCTTTCAACGGTGAACAATTGAAGAAAACATCCTCTGGGAACCCCTATCAATTTCTCCATCACATGTCTGGTGGATCTCACACAGCAGAGGATGGCGACGTAGTCGTGGACAGTGGGAACTCACACAATGGAATCAATTTTGTTGCAAGGCTAAATCAGTTTCAGCAAATGCAGCAACAGCATCGCGAACATTTTAGAGCACAGGCACAGAGACGCAAAAATTCCACCTCCGTATCAAAGgaggaggaggtacaaaggcaagaagaagaaacaaagagaCCTCATTCGAATGAGCTTAATGTTCCAAGATCATTCAAGAGAGCTAGCTAA 2163 0.399 MADALSSIPAAVLRNLADKLYEKRKNAALEIENIVKQLAANGDHDKIKAVINLLTTEFINSPQANHRKGGLIGLAAATVGLTSETAQHLENIVLPVLSSFSDQESRVRYYACEALYNIAKVVRGDFIVFFNKIFDALCKLSADSDGNVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYASILGAILPCISDKEEKIRVVARETNEELRAIKADPAEAFDVGAILSIARRQISSEWEATRIEALHWISTLVNEYRTEVLQYLNDIFDTLLKALSDPSDEVVLLVLEVHAYIAKDPQHFRQLVVFLMHNFRTDNTLLEKRGALIIRRLCVLLDAERVYRELSTILEGESDLDFASIMVQALNLILLTSSELSEIRVLLKQSLVNPAGKDLFVSLYASWCHSPMAIISLCFLAQTYQHASTVIQSLVEEDINVKFLVQLDKLIRLLETPVFAYLRLQLLEPGRYTWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNGEQLKKTSSGNPYQFLHHMSGGSHTAEDGDVVVDSGNSHNGINFVARLNQFQQMQQQHREHFRAQAQRRKNSTSVSKEEEVQRQEEETKRPHSNELNVPRSFKRAS 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00113 720 MobiDBLite consensus disorder prediction 686 711 - -
Tsu02g00113 720 Gene3D - 236 417 IPR011989 -
Tsu02g00113 720 Coils Coil 17 37 - -
Tsu02g00113 720 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Tsu02g00113 720 SUPERFAMILY ARM repeat 3 542 IPR016024 -
Tsu02g00113 720 MobiDBLite consensus disorder prediction 669 720 - -
Tsu02g00113 720 ProSiteProfiles HEAT repeat profile. 93 127 IPR021133 -
Tsu02g00113 720 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Tsu02g00113 720 Gene3D - 2 225 IPR011989 -
Tsu02g00113 720 PANTHER TAX1 BINDING PROTEIN-RELATED 4 694 IPR026825 GO:0006661|GO:0070772
Tsu02g00113 720 PANTHER PROTEIN VAC14 HOMOLOG 4 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00113 Tsu-Chr2 821032 830260 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00113 02 821032 830260 Tsu02g00113 02 821032 830260 ECH