Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00111 ATGTCATCACCGAATTATGCCCACGCGCACACGCCACTCATTCGCCCCCGCCGCGTGGGCCGCACGCCAGTCCTCGCACTCCTTCTCGGACGCCGAGGTCCTTCCGTTCTTGTCCGTGAAACAGCGGCGCGTGAGCTTGAGGAGCGTCGCGCTGATTGGGGTTACTCTAAGCCGGTAGTATTACTTGACATCGCGTGGAACACGGCTTTCGTGGTGGTTGCTGCGGTTATGCTAGGTTGCACCGTTGACGAGAATCCTAACACGCCGATTCGGCTGTGGATCTGTGGTTACACGGTGCAGTGTCTGGTTCACGTGGCGTTGGTGTGGCTGGAGTACAGGAGAAGGAACGGAGTTGGAGGAGGAAGGGATGAAGAAGCTTTTAATGAAGATGTTAACGatagtgaggatgatgatggtgatgttgAATTTCGTAATTCTTCTCGCTCCGGATTTGCAAAACGATGTGCGTCATTGAATACCATGCTTTCATTGGTTTGGTGGATGGTGGGCTTTTATTGGGTTGTCTATGGTGGTGATGTTCTAATGCAAGACGCTCCGCGGTTATACTGGTTAGCCGTTGTCTTTCTAGCATTTGATGTCTTCTTCGCTATCTTTTGTGTTGCTTTGGCATGCTTAATTGGCATTGCCCTCTGCTGTTGTTTACCCTGTATTATTGGCATTCTCTATGCTGTTGCGGGACAGGAGGGTGCATCTGAATCAGATCTCAGTATACTTCCAAAATACAGGTTTCAGGCTGTAAGCAATGAAGAAACACCTGATCCAAGAGGTGGATCAATGGTTCCCATTGAAAATAGCAGTGGTGCAAATGAACGAGTACTTTCACCCGAGGATGCGGAATGCTGTATATGCATCTCTTCCTATGAGGATGGAGCAGAACTTCATGCTCTTCCTTGTAACCACCATTTCCACTCCTCATGCATAGTGAAATGGTTAAAGATGAATGCAACTTGTCCTCTTTGCAAATACAATATTCTTAAGGGAAATGAACAGGTGTGA 1017 0.472 MSSPNYAHAHTPLIRPRRVGRTPVLALLLGRRGPSVLVRETAARELEERRADWGYSKPVVLLDIAWNTAFVVVAAVMLGCTVDENPNTPIRLWICGYTVQCLVHVALVWLEYRRRNGVGGGRDEEAFNEDVNDSEDDDGDVEFRNSSRSGFAKRCASLNTMLSLVWWMVGFYWVVYGGDVLMQDAPRLYWLAVVFLAFDVFFAIFCVALACLIGIALCCCLPCIIGILYAVAGQEGASESDLSILPKYRFQAVSNEETPDPRGGSMVPIENSSGANERVLSPEDAECCICISSYEDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00111 338 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 338 - -
Tsu02g00111 338 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 268 336 IPR013083 -
Tsu02g00111 338 Pfam Ring finger domain 286 328 IPR001841 -
Tsu02g00111 338 ProSiteProfiles Zinc finger RING-type profile. 287 328 IPR001841 -
Tsu02g00111 338 SMART ring_2 287 327 IPR001841 -
Tsu02g00111 338 PANTHER TARGET OF ERK KINASE MPK-1 6 338 - -
Tsu02g00111 338 CDD RING-H2_PA-TM-RING 286 328 - -
Tsu02g00111 338 SUPERFAMILY RING/U-box 277 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00111 Tsu-Chr2 789477 793912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00111 3 337 C3H Transcription Factor Family AT1G68070 66.472 6.47e-168 469
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00111 02 789477 793912 Tsu02g00111 02 789477 793912 ECH