Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00096 ATGGTGTCAAGATCTTATTCAAATCTACTAGAGCTAGCCTCTGGTGAGTCTCCAACGTTTGAAAATATGAACAGGAGAATTCCAAGGATTATGACTGTTGCTGGTTTGATATCTAATGTTGATGACGACCCTTTGGAGAGTGTGTGTTCTGACCCATCTTCTTCATCTGTTCAAAGAGAAAGGATCATAATAGTGGCGAATCAGCTTCCTATAAAGGCTCAAAGGAAGCAAGAtggtaataacaaaaataattggTTTTTCAGTTGGGATGAGAATTCACTTCTACTTCAACTCAAAGATGGGTTAGgagatgatgatattgatgttatttatgtTGGTTGCCTTAAGGAAGATGTTCATCCAAATGAACAAGATGAGGTTTCACAGATACTACTTGAGACCTTTAAATGTGTTCCAACTTTTCTTCCAGGTGATCTTTTTACAAGGTATTATCATGGCTTTTGTAAGCAACAGTTATGGCCACTGTTCCATTACATGTTGCCTTTGTCACCAGACCTTGGTGGTAGGTTCAATAGGTCACTGTGGCAAGCTTATGTATCAGTCAATAAGATATTTGCTGATAGGATTATGGAAGTGATTAACCCTGAAGAtgattatgtttggatacatgATTATCATCTCATGGTTTTACCAACTTTTTTGAGAAAAAGGTTTAATAGAGTGAAACTGGGATTTTTTCTCCATAGCCCTTTCCCTTCATCAGAAATTTACAAGACATTGCCTATTAGGGAAGAGCTTTTGAGAGCCCTTTTGAACTCTGATTTGATTGGTTTTCACACTTTTGATTATGCAAGACATTTCCTCTCATGTTGTAGTAGGATGCTTGGTCTTAGTTATGAATCCAAAAGAGGTTATATTGGGATTGAGTATTATGGTAGGACCGTAAGTATCAAAATTCTTCCTGTTGGCATACACATGGGTCAGCTTCAATCAGTTCTGAGCCTACCAAAGACTGAAGAGAAAGTTTCTGAGCTTATTGAACAGTTTTCTGATAAAGGAAAGATAATGTTACTTGGTGTGGATGACATGGATATCTTTAAAGGGATAAGTTTGAAGTTATTGGCCATGGAACAGCTGCTTATTCAGCACCCTGAGTGGCATGGAAAGGTTGTATTGGTTCAGATAGCCAATCCTGCAAGAGGGAAAGGGAAGGATGTGAAGGAAGTGCAAGCCGAGACAAAGGCGACCGCAATGCGGATTAATGAAAGATTTGGTAAACCTGGTTATGATCCTGTGATTCTGATTGAGGAGCCATTAAGGTTTTATGAAAAAGTTGCATACTATGTTGTAGCTGAATGTTGTCTAGTAACTGCAGTTAGGGATGGAATGAATCTCATACCTTATGAATATATAATCAGTCGTCAAGGAACTGAAAAATTGGACAAAGTATTGGGATTAGGTCCATCCCTTAAGAAAAGCATGTTGGTTGTGTCTGAGTTTATTGGTTGTTCACCATCTTTAAGTGGAGCTATCAGAGTGAATCCATGGAATATTGATGCAGTAGCAGATGCAATGGACTCAGCTTTGGAAATGGCTGATTCAGAGAAACAGCTTAGGCACGAGAAGCATTACAAATATGTTAGTACTCATGATGTCGGTTACTGGGCCCGTAGCTTCTTGCAAGATTTGGAAAGGACTTGTAGTGATCATGTAAGACGAAGGTGGTGGGGAATTGGTTTCGGATTAAGTTTTAGAGTTGTAGCACTTGATCCAAACTTCAAGAAGCTCTCAATGGAGCACATTGTTTCTGCTTACAAGCGGACAAAAACTAGGGCCATCCTTCTAGATTATGATGGTACACTAATGCCCCAGGTTTCCATTGATAAGAGCCCAACCAGTAATTCCATTAAAATGCTTAATAGTTTGTGTAGAGATGAGAACAACATGGTGTTTCTAGTCAGTGCTAAAAGCCGTAAGACGCTTGCTGAATGGTTTTCTCCGTGTGAAAATCTGGGAATTGCCGCTGAGCATGGTTACTTTTTAAGGTAA 2010 0.3816 MVSRSYSNLLELASGESPTFENMNRRIPRIMTVAGLISNVDDDPLESVCSDPSSSSVQRERIIIVANQLPIKAQRKQDGNNKNNWFFSWDENSLLLQLKDGLGDDDIDVIYVGCLKEDVHPNEQDEVSQILLETFKCVPTFLPGDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGIEYYGRTVSIKILPVGIHMGQLQSVLSLPKTEEKVSELIEQFSDKGKIMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWHGKVVLVQIANPARGKGKDVKEVQAETKATAMRINERFGKPGYDPVILIEEPLRFYEKVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGTEKLDKVLGLGPSLKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMADSEKQLRHEKHYKYVSTHDVGYWARSFLQDLERTCSDHVRRRWWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTKTRAILLDYDGTLMPQVSIDKSPTSNSIKMLNSLCRDENNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFLR 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00096 669 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 669 IPR001830 GO:0003824|GO:0005992
Tsu02g00096 669 Pfam Glycosyltransferase family 20 61 551 IPR001830 GO:0003824|GO:0005992
Tsu02g00096 669 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 669 - -
Tsu02g00096 669 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 554 - -
Tsu02g00096 669 SUPERFAMILY HAD-like 598 668 IPR036412 -
Tsu02g00096 669 Pfam Trehalose-phosphatase 601 669 IPR003337 GO:0003824|GO:0005992
Tsu02g00096 669 Gene3D - 597 669 IPR023214 -
Tsu02g00096 669 Gene3D Glycogen Phosphorylase B; 318 535 - -
Tsu02g00096 669 CDD GT20_TPS 61 551 IPR001830 GO:0003824|GO:0005992
Tsu02g00096 669 Gene3D Glycogen Phosphorylase B; 53 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00096 Tsu-Chr2 697388 702083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00096 1 669 Trehalose Biosynthesis Gene Families AT1G68020 81.791 0.0 1161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00096 02 697388 702083 Tsu02g00096 02 697388 702083 ECH