Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00087 ATGTCGACTCCAGTGAACCATACAGATAAAGGGGCTGAAGTTGTTCCTCAATCTACAGTTACACCGAAATGGACAATTCATGTTTCAGACATAAAAACAGTTAAAGTAAGCAATGTATCAGCGGATGCCACAGAGAAGGATATCAAAGAATTCTTCTCATTCTCTGGTGACATCCAATATGTTGAGATGCAAAGGGAAACTGAGAGCACTAAGACTGCTTATGTTACCTTTAAGAATACACAAGGAGCCGACACAGCAGTGCTCTTGACGGGTTCAAATATTGCTAATGGTTCTGTTACCATCACACCAATGGAGAACTACCAACTGCCCCCTGAAGTTATTCCCTCTAGTCCTAACCAAAGGCAAACTTCTACCGCTGTTAAGAAGGCCGAAGATGTGGTGAGCACCATGCTTGCCAAAGGTTTTGTTTTGGGAAAAGGTGCAATCAATAGAGCAAAATCATTTGACGAACGCCACCACGTAATTTCAAATGCTTCTGCCACTGTTGCTTCGATTGATCGTAAAATCGGATTGAGTGGTAAATTTAGCGTTGGAACAACTATAGTAAATGAAAAAGTGAGAGAGATGGATGAAAAATTCAAGGTTTCTGAAAAAACAAAGTCTGCTTACGTTGCTGCCGAACAAAAGGCAACCAGTGCTGGATCTGCAATCATGAGCAATCCTTATGTATCAACCGGAGCTTCATGGGTGTCAAGCGCAATTACCGTTGTTGCAAAAGCAGCTGAAGATGTAACTACAAAGACTATGGAGAAGGTTGAAATGGCCGAGGCTGATAAGAAAGAGACAATTTATAGCGAAAAGAAAGACGCAGTTGATGAATTAGCACATATACACTCTGAGAAACCTTCAACTGGGAGTTCGCCAAAAGTTACTCCTAAATCATGCGATGATAGTAAGTTGGGAGTTGCTTCTAAACCTAATATATGA 948 0.4114 MSTPVNHTDKGAEVVPQSTVTPKWTIHVSDIKTVKVSNVSADATEKDIKEFFSFSGDIQYVEMQRETESTKTAYVTFKNTQGADTAVLLTGSNIANGSVTITPMENYQLPPEVIPSSPNQRQTSTAVKKAEDVVSTMLAKGFVLGKGAINRAKSFDERHHVISNASATVASIDRKIGLSGKFSVGTTIVNEKVREMDEKFKVSEKTKSAYVAAEQKATSAGSAIMSNPYVSTGASWVSSAITVVAKAAEDVTTKTMEKVEMAEADKKETIYSEKKDAVDELAHIHSEKPSTGSSPKVTPKSCDDSKLGVASKPNI 315
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00087 315 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 35 95 IPR000504 GO:0003723
Tsu02g00087 315 SMART rrm1_1 33 102 IPR000504 GO:0003723
Tsu02g00087 315 Gene3D - 28 102 IPR012677 -
Tsu02g00087 315 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 106 IPR000504 GO:0003723
Tsu02g00087 315 SUPERFAMILY RNA-binding domain, RBD 28 105 IPR035979 GO:0003676
Tsu02g00087 315 MobiDBLite consensus disorder prediction 278 315 - -
Tsu02g00087 315 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 8 307 - -
Tsu02g00087 315 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 8 307 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tsu02g00087 Tsu-Chr2 593977 597488 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00087 02 593977 597488 Tsu02g00087 02 593977 597488 ECH