Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00086 ATGGTGGGGAAGAATCATTCACCAAAGGAAAAGAATAGAGATTGGATTGGAGCACTTCTGAATAGTAGCTCAGGTTATTGTGATGATCATCGCGATCTTCGATCTAATGAGAAGAATACTTTTTGTGTAGATTGTGCAGTTAGATTGTGTAGGCACTGTAAGGAAGCTCATTCTATTCATAGAAGGTTTCAGATATATAGATATTCATATCAGGACGTTTTTCGTCATTGCGACTTTCAGAAGCATTTTGATTGCTCAAATATTCAGACTTACATATCCAATAACGAAAGGATTGTGCATCTAAAACCTCGGCCTCCAATCTATAAATCTAAAGCTGGTGATCAATGCCCTGAATCTAAATCCAAAGAAAACAACTTATCAGCAAGATTTAAGTCGGGTGGCAGTGCATGCGAAGAATGTGGAAAACACTTACAAGATGAGCGTAGTCGATTCTGCTCCATTATATGCAAGATCTCGGTGCTTCCAAATCATCACTCACAAAAGAGTTCAGTTGATTCTTTCAACCAAAGTGGTAGATGCAACATCACTCCAAAAACTGAGGCCATTGACTTTACTATGACTGATAACCTTAACTCGGAACCAGAGTCATCTATTTCTGAAGCCGAGCCATGTGGGCGGGTAGAAGTTCTGAACTTCAGAAAGCGTCCGAGAAAAACCACTCCTCAGAAGCCTCTCTTTGTTTTCAGTTCTTAG 714 0.3978 MVGKNHSPKEKNRDWIGALLNSSSGYCDDHRDLRSNEKNTFCVDCAVRLCRHCKEAHSIHRRFQIYRYSYQDVFRHCDFQKHFDCSNIQTYISNNERIVHLKPRPPIYKSKAGDQCPESKSKENNLSARFKSGGSACEECGKHLQDERSRFCSIICKISVLPNHHSQKSSVDSFNQSGRCNITPKTEAIDFTMTDNLNSEPESSISEAEPCGRVEVLNFRKRPRKTTPQKPLFVFSS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00086 237 SMART bboxneu5 22 65 IPR000315 GO:0008270
Tsu02g00086 237 Pfam PLATZ transcription factor 67 158 IPR006734 -
Tsu02g00086 237 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 230 - -
Tsu02g00086 237 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 230 - -
Tsu02g00086 237 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00086 Tsu-Chr2 586070 588104 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Tsu02g00086 PLATZ 4.9e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00086 02 586070 588104 Tsu02g00086 02 586070 588104 ECH