Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00082 ATGTCTGTGCCACCGGTGCAGTGTGTATACGTAACAGAAGACTGTGTTCGCGAATGGAGGACTGGAAACCCTTCTTTCAAGGTCTCTCAACCTGTTCCAATGCTTCGCTTTCTCTACGAGCTCTCTTGGACTATGGTTCGGGGTGAATTGCCGTTTCCGAAGTGTAAAGTAGCATTAGATTCTGTTGAATTTTTGGATAAAGTTTCAGCTGAGAAAGTAGCATCAAATTTTGCAGATATAGTGAGTCAGATGGCTCAAGATCTTACATTGTCAGGAGAGTTCCGTTCTCGTCTCATTAAACTGGCGAGATGGCTTGTAGAATCGGAATTGGTTCCAGTCAGGTTACTTCAAGAACGTTGTGAGGAAGAATTTTTGGGGGAGGccgaatttatcaaaattaaagcTCAGGAGTTGAAGGGAAAAGAGGTCAGAGTTAATACACGACTTCTTTACCAGCAAACCAAATTCAACCTTCTCAGAGAAGAGAGTGAGGGCTATGCCAAACTGGTCACTCTACTTTGTCGGGACTCTGAAGCGCCGACTCAAAAAGGATCTGCATCAACAATTGGCATTATTAAGTCGTTGATTGGCCATTTTGATTTGGATCCAAACCGTGTTTTTGATATTGTACTTGAGTGTTTTGAACTTCAGCCCGATAATGATGTGTTTATAGAGCTGATTCCTATTTTTCCCAAGTCTCATGCTTCACAGATTCTTGGATTTAAATTTCAATACTATCAGCGCATGGAAGTCAGTAATCCTGTACCATATGGGCTCTATAGACTTGCAGCCTTGCTGGTGAAGCAAGATTTTATTGATCTTGATTGCATATATGCTCATTTACTCCCCAAGGATGAAGAAGCCTTTGAGCATTATAGCACTTTCTCTTCCAAGCGCTTTGATGAGgctaataaaattggaaaaataaacCTTGCTGCTACTGGAAAAGATCTAATGGATGAAGAGAAAACGGGGGATGTCACTATTGATCTCTTTGCTGCTATAGCCATGGAAACTGATGCAATTGATGAGCGGAAATCCGAGCTTCATACCAGTCAAACTTTGGGCTTGCTTACTGGTTTTCTTTCTGTGGATGACTGGTATCATGCACATGTACTATTTGAACGCCTCTCACCACTGAATCCGGTGGAACATATCCAAATATGTGATAGTTTGTTTAGGCTTATTGAGAAATCAATTTCTTCACCGTATGATGTTATTCGCCAAGCACATCTTCAAAACCCTGGATCGTCTGCTGGAGGCAGCACTGATGCTATGAACGTAGATAACCCTTCAGGACACGGTTCTTTCATTGATCTCCCAAAGGAACTTTTTCAGATGCTTGCTTGTACTGGACCTTTTCTCTACCGAGATACTATGTTGTTACAGAAGGTTTGTAGGGTGTTGAGAGGTTATTACCTTTCTGCTCTTGATCTTGTAAGTCATGGCGATGGTGCCTTGAATCCTCAATTTCATGTTATTGGAAATCCTCACCTACATTTGAAAGAAGCAAGGCTAAGGGTGGAGGATGCTTTAGGAGCTTGTCTACTACCTTCTCTACAGTTGGTTCCTGCTAATCCAGCTGTTGGCCAGGAAATTTGGGAACTAATGAGTCTTCTTCCTTATGAGGCACGATATCATTTATACGGTGAATGGGAAAAAGATGATGATCGCTATCCTATGCTATTGGCTGCTAGACAAACTGCCAAGtTGGACACTAGACGTATTTTGAAACGGCTAGCAAAGGAAAATTTGAAGCAGCTGGGTCGGATGGTCGCAAAATTAGCTCATGCCAACCCTATGACTGTCCTCCGAACAATTGTTCACCAGATTGAGGCATACAGAGACATGATTACTCCTGTAGTGGATGCGTTTAAGTATTTGACTCAgCTTGAATATGATATATTGGAATACGTTGTGATTGAGCGATTGGCACTTGGTGGACGTGATAAGTTGAAGGATGACGGGCTTAATTTGTCAGACTGGCTTCAATCTCTAGCTTCATTTTGGGGCCACCTatGTAAAAAGTACCCATCAATGGAATTGCGGGGCCTTTTCCAGTATCTTGTGAACCAGTTAAAAAGGGGACAAGGAATTGAGCTTGTTCTACTGCAGGAGCTTATCCAACAAATGGCAAATGTTCAGTACACAGAGAACTTGACTGAGGAACAGCTGGATGCTATGGCAGGGAGTGAGACTCTGAAATATCAAGCAACTTCTTTTGGGATGACTCGAAATAATAAGGCATTGATAAAGTCAACTAGCAGGCTTAGAGATGCATTACTTCCTAAAGATGAACCGAAGTTGGCAACCCCGCTCTTGCTTCTTCTTGCTCAGCATCGTTCTCTAGTTCTCGTCAATGCAGATGCACCCTACATTAAAATGGTCAGTGAACAATTTGATAGATGCCATGGAACTCTTCTTCAATATGTGGATTTTCTAGGCAGTGCAGTCACACCAGGGTCAAATTATGCTATTCTTATTCCCTCACTTGATGACCTGGTCCATCTTTACCACTTGGACCCTGAGGTTGCTTTCTTGATATATCGCCCTGTTATGAGACTTTTCAAGTCTCAGAGGACTCCCGATGTTTGCTGGCCCTTGGATGATAAAAATGCTGCAAGTGATTCATCTACGAACTTTGAGTCTGACCCTGCAGATTCTTCTGGTAGTATGGTTCTAGATATTGGCTCCAACAAAAAGCAGATTAGTTGGTCATATCTTCTTGATACTGTTAAAACCATGTTGCCTTCAAAAGCATGGAATAGCCTATCTCCTGATCTTTATGCAACATTTTGGGGTCTCACGTTATATGATCTGTACGTTCCGAAAAACCGTTATGAGTCAGAGATAGCCAAGTTGCATGCTAATCTTAAATCATTGGAGGAGCTTTCTGACAATTCAAGCTCAGCAATCACCAAGAGGAAGAAAGAGAAGGAAAGAATTCAAGAATCTCTTGACCGTCTTATCAGTGAACTGCATAAACATGAAGAAAATGTTGCATCTGTCAGCAGACGGCTCTCTCATGAAAAAGACAGATGGTTAAGTTCCTGTCCTGATACCTTGAAGATTAACATGGAGTTTCTTCAGCGTTGCATATTTCCACGCTGTACTTTCAGTATGCCAGACGCTGTTTATTGTGCTATGTTTGTCCACACACTTCATTCCCTTGGAACACCCTATTTTAACACAGTCAACCACATAGATGTTCTTATTTGTAAGACTCTTCAACCAATGATATGCTGCTGCACTGAATATGAGGTTGGTAGGCTTGGCAGGTTTCTCTACGAGACTTTGAAGATTGCTTACCATTGGAAGAGTGATGAATCTATTTATGAACGGGAGTGTGGAAACAAGCCGGGATTTGCTGTTTATTATAGATTTCCAAATAGCCAGCGAGTTACATACGGACAGTTCATTAAGGTACACTGGAAATGGAGTCAAAGAATCACAAGGTTACTAATTCAGTGTCTGGAATCTAGCGAGTACATGGAGATTAGAAATGCTCTTATAATGTTGACTAAAATTTCTAGTGTTTTCCCTGTTACACGGAAGAGTGGGATAAACCTTGAAAAGCGGGTAGCTAAGATTAAAAGTGATGAAAGAGAGGATCTTAAGGTTTTGGCAACTGGTGTAGCAGCAGCGCTGGCTGCTAGGAAGCCTTCTTGGGTTACCGAAGAAGAATTTGGTATGGGTTTTCTTGAATTGAAGCCTGCACCATCTATGACTAAATCCGCAGCTGTACAAAGTGGGATAGGTCCTCATGTTTCTCAAACTGAATCCGCCAGTGGGAAACATATGGATTCTGGAAACACAGTCAAAGACCAGACAGTAAGAACAAAAACTGCAGATGGCAGAACGGAAAGCATTACAGCAGCAAAATCTGATTCTGGTCACGTAAAACTCAAGGGTAACTCAATGGTGAATGGATTGGATGCTCAATCATCTCTACCCTCACCTGCTGGACAATCTGGGGCATTAAAATCCGTGGAAAATCCCAAGCAAGTGGAAGAATCCATTAGTAGGGCACCAGATGAACACGTTACAAGAAATGTTGAGTCAAGAACCTCTGTGAAACGTTCGGTGGCTACAGGCTCAGTTTTGAAGCCTTCAAAACAAGATCCTTTGAAAGAAGATGGTAGATCTGGAAAAAATGTTACTAGAACTTCTGGTTCCTCAAGCAATGACAAGGATCTTCAGATCCATGCATCAGATCATGGAAGACACACTGGAACAAACGTCTCATCATCGGTCAGTGCTAATGGTAACAGCGTCTCAGGTTCTGCAAAAGGCTTGGCTCCATTGGCAGAGGTTGGAGCTACCAAATCATCTATGGTGAAGGATGATGGAAATGATATTGCTGACTTCACAAGAGGATCCTCTTCTCGTGTAGTTCATTCCCCTAGGCATGAAAACACAGCTACCTCAAAGTCTAGTGATAAAATTCAGAAGCGTGCTGGTTCTGTTGATGAACTAGACAGACTAGGTAAACGGCGGAAAGGGGATGTAGATCTAAGAGATTTAGAGGGTGAAGTTCGATTCTCTGAAAGAGAGAAGCTGATGGATCCGCGATTGGGTGATGACAAAGTGGGACCAGATGAACTTGGTCAATTCAGAGCAGGTGATAAGACATTGGAAAggccaaaagaaaaaggaaatgaaaGATATGAAAGGGAACACAGGGAAAGATTGGACCGTCTGGACAAGTCTCGTGGTGATGACTTTGTTGTAGAAAAACCTAGGGACAGGTCGATAGAAAGATATGGAAGAGAACGATCTGTTGAGAGAATGCAAGAGAGGAGTTTCAATAGACTCCCTGACAAGGCTAAGGATGAAAGAAGTAAGGATGATAGAAATAAATTACGATACAATGATACACCGATAGAAAAATCTCACGCTGAGGGCCGCTTCCATGGACAAAACTTGCCTCCACCACCCCCTTTACCTCCTAATATGGTTCCTCAATCTGTTGGTGCTGGTAGGCGTGATGAAGATGCTGATAGGAGGTATGGAGCTACAAGGCATTCTCAAAGACTTTCTCCAAGGCATGAAGAAAAAGAACAGAGACGGTCTGAAGAGGCTGTTATTTTGCAGGATGACCCCAAACGTAGAAAAGAAGATGATTTTCGAGATCGTAAGCGTGAAGAAATTAAGGTGGAAGAGAGGGAAAGAGAGAAAGCAAGCATTCTAAAAGAAGAGTTGTTGGATTTAAATGCTGCATCCAAGAGGCGTAAACTTAAGAGGGAGCATCTACCAACTATGGAGCCCGGGGAGTACTCACCAGTTGCTCCTGCACCTCCTCTCCCCGGTATTAGTATGTCACAAGGGTATGATGGAAGAGACAGAAAAGGGCCAATGATCCAGCATGCCAATTACATAGATGAACCAAGTCTTAGGATTCACGGTAAAGAGGTAGCCAGCAAGCTGAATCGTCGTGAATCAGATCCCTTGTATGACCGTGAGTGGGATGATGAGAAGAGACAAAGAGCTGATCAAAAGCGAAGGCATCGGAAGTAA 5517 0.4218 MSVPPVQCVYVTEDCVREWRTGNPSFKVSQPVPMLRFLYELSWTMVRGELPFPKCKVALDSVEFLDKVSAEKVASNFADIVSQMAQDLTLSGEFRSRLIKLARWLVESELVPVRLLQERCEEEFLGEAEFIKIKAQELKGKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRDSEAPTQKGSASTIGIIKSLIGHFDLDPNRVFDIVLECFELQPDNDVFIELIPIFPKSHASQILGFKFQYYQRMEVSNPVPYGLYRLAALLVKQDFIDLDCIYAHLLPKDEEAFEHYSTFSSKRFDEANKIGKINLAATGKDLMDEEKTGDVTIDLFAAIAMETDAIDERKSELHTSQTLGLLTGFLSVDDWYHAHVLFERLSPLNPVEHIQICDSLFRLIEKSISSPYDVIRQAHLQNPGSSAGGSTDAMNVDNPSGHGSFIDLPKELFQMLACTGPFLYRDTMLLQKVCRVLRGYYLSALDLVSHGDGALNPQFHVIGNPHLHLKEARLRVEDALGACLLPSLQLVPANPAVGQEIWELMSLLPYEARYHLYGEWEKDDDRYPMLLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANPMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLALGGRDKLKDDGLNLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKRGQGIELVLLQELIQQMANVQYTENLTEEQLDAMAGSETLKYQATSFGMTRNNKALIKSTSRLRDALLPKDEPKLATPLLLLLAQHRSLVLVNADAPYIKMVSEQFDRCHGTLLQYVDFLGSAVTPGSNYAILIPSLDDLVHLYHLDPEVAFLIYRPVMRLFKSQRTPDVCWPLDDKNAASDSSTNFESDPADSSGSMVLDIGSNKKQISWSYLLDTVKTMLPSKAWNSLSPDLYATFWGLTLYDLYVPKNRYESEIAKLHANLKSLEELSDNSSSAITKRKKEKERIQESLDRLISELHKHEENVASVSRRLSHEKDRWLSSCPDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPYFNTVNHIDVLICKTLQPMICCCTEYEVGRLGRFLYETLKIAYHWKSDESIYERECGNKPGFAVYYRFPNSQRVTYGQFIKVHWKWSQRITRLLIQCLESSEYMEIRNALIMLTKISSVFPVTRKSGINLEKRVAKIKSDEREDLKVLATGVAAALAARKPSWVTEEEFGMGFLELKPAPSMTKSAAVQSGIGPHVSQTESASGKHMDSGNTVKDQTVRTKTADGRTESITAAKSDSGHVKLKGNSMVNGLDAQSSLPSPAGQSGALKSVENPKQVEESISRAPDEHVTRNVESRTSVKRSVATGSVLKPSKQDPLKEDGRSGKNVTRTSGSSSNDKDLQIHASDHGRHTGTNVSSSVSANGNSVSGSAKGLAPLAEVGATKSSMVKDDGNDIADFTRGSSSRVVHSPRHENTATSKSSDKIQKRAGSVDELDRLGKRRKGDVDLRDLEGEVRFSEREKLMDPRLGDDKVGPDELGQFRAGDKTLERPKEKGNERYEREHRERLDRLDKSRGDDFVVEKPRDRSIERYGRERSVERMQERSFNRLPDKAKDERSKDDRNKLRYNDTPIEKSHAEGRFHGQNLPPPPPLPPNMVPQSVGAGRRDEDADRRYGATRHSQRLSPRHEEKEQRRSEEAVILQDDPKRRKEDDFRDRKREEIKVEEREREKASILKEELLDLNAASKRRKLKREHLPTMEPGEYSPVAPAPPLPGISMSQGYDGRDRKGPMIQHANYIDEPSLRIHGKEVASKLNRRESDPLYDREWDDEKRQRADQKRRHRK 1838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00082 1838 Coils Coil 1710 1740 - -
Tsu02g00082 1838 MobiDBLite consensus disorder prediction 1406 1426 - -
Tsu02g00082 1838 PANTHER THO2 PROTEIN 11 1748 IPR040007 GO:0000347|GO:0006397|GO:0006406
Tsu02g00082 1838 Coils Coil 972 1006 - -
Tsu02g00082 1838 Pfam Transcription- and export-related complex subunit 592 667 IPR021726 -
Tsu02g00082 1838 Pfam THO complex subunit 2 N-terminus 69 416 IPR032302 -
Tsu02g00082 1838 Pfam THO complex subunit 2 N-terminus 443 590 IPR032302 -
Tsu02g00082 1838 MobiDBLite consensus disorder prediction 1245 1426 - -
Tsu02g00082 1838 MobiDBLite consensus disorder prediction 1308 1336 - -
Tsu02g00082 1838 MobiDBLite consensus disorder prediction 1455 1472 - -
Tsu02g00082 1838 Coils Coil 944 964 - -
Tsu02g00082 1838 MobiDBLite consensus disorder prediction 1473 1636 - -
Tsu02g00082 1838 MobiDBLite consensus disorder prediction 1796 1830 - -
Tsu02g00082 1838 MobiDBLite consensus disorder prediction 1660 1728 - -
Tsu02g00082 1838 MobiDBLite consensus disorder prediction 1245 1294 - -
Tsu02g00082 1838 Pfam Transcription factor/nuclear export subunit protein 2 921 1215 IPR021418 -
Tsu02g00082 1838 MobiDBLite consensus disorder prediction 1338 1354 - -
Tsu02g00082 1838 PANTHER THO COMPLEX SUBUNIT 2 11 1748 - -
Tsu02g00082 1838 MobiDBLite consensus disorder prediction 1748 1838 - -
Tsu02g00082 1838 MobiDBLite consensus disorder prediction 1443 1728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00082 Tsu-Chr2 542129 560175 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00082 02 542129 560175 Tsu02g00082 02 542129 560175 ECH