Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01207 atgaggCTATGGAAAAGTGCCTCAGGAGCTTTAAAAGATAGTTATAGCATTTTGGTTGCAAAGCTTTCACCATATGGACCATGTAGAAACCCTGAACTTGAAACCAATATTATAAAAGCAACAAGCCATGATGAACAATGCATGGATTATAAGAATGTTCAAAAAGTTTTTCAATGGCTAAGAATATCACCTTTGTACCTTAAACCACTTTTATGTGTACTTTCATTGAGAATGCAAAAGACACGTAGTTGGGTTGTAGCACTTAAAGGTTTAATGTTAATTCAtggaattttttgttttgaattaccAATGGCTCAAAGAATGGGAAGGCTACCTTTTGATTTATCACATTTTAGCGACGGGTATGTAACTTCGGAAAAAGGTTGGGTTCTTAATGCTTTCGTACGATCTTATTTCACGTATTTGGATCAAAGATCAGCATATTTTAGGGCGGAAACaaacaaattacaaaccaaaaagGGAAAGGAAATGGAAGAAACTCCGTTAATCGAAGAGTTGAAGAATTTGGAGGAATTAcaaaaattgattgatatgttgTTACGAATTAAACCTAGGAATGAATTGAACATGAATATTACTCTTATTCTAGAAGCAATGGATTGTATCATGGATGAGATTGTGGAAGTTTATTGTAAATTTAGCAAAGAGATTAATCGCGTGTTGTCATGGGTTTGTGACATTGGTGGAAAAGAAGAAGCATATATTGGTCTTGATATTGTAAGAAAAACTCAATTACAaggtgaaaaaataattttgtacttCGATTTTTGTAAAGAAATTGGCGTTCTTAATAATTCGGGGTGCCCTACAATTGTGAGAATTAACGAAGAAACAATTGAAGAACTTAAGAGAATAATCAAAGGTGGTGATGAGAAAGCTATTGTGGTTAGAGATAATTCTAAGAAATTTGAGAATTGTTTGAAGACTACCATCATTACGGATCAATGGGAGGTATTTCTTGATGATATTATTGTTGAGGATGAACAAAAACATGCTCCTAATGCAATATTAAGCATTCTTGATGCTAATAATCCTTTTGTGGATGAACCTTATAGCATAGTACCTTATAATCCTGTTCAAAATTATGATTTTCCAGATCTAATTAGTTTGTAG 1134 0.3078 MRLWKSASGALKDSYSILVAKLSPYGPCRNPELETNIIKATSHDEQCMDYKNVQKVFQWLRISPLYLKPLLCVLSLRMQKTRSWVVALKGLMLIHGIFCFELPMAQRMGRLPFDLSHFSDGYVTSEKGWVLNAFVRSYFTYLDQRSAYFRAETNKLQTKKGKEMEETPLIEELKNLEELQKLIDMLLRIKPRNELNMNITLILEAMDCIMDEIVEVYCKFSKEINRVLSWVCDIGGKEEAYIGLDIVRKTQLQGEKIILYFDFCKEIGVLNNSGCPTIVRINEETIEELKRIIKGGDEKAIVVRDNSKKFENCLKTTIITDQWEVFLDDIIVEDEQKHAPNAILSILDANNPFVDEPYSIVPYNPVQNYDFPDLISL 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01207 377 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 340 IPR045192 GO:0048268|GO:0072583
Tsu01g01207 377 Pfam ANTH domain 32 293 IPR011417 GO:0005543
Tsu01g01207 377 CDD ANTH_N_AP180_plant 33 146 - -
Tsu01g01207 377 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Tsu01g01207 377 SUPERFAMILY GAT-like domain 165 294 - -
Tsu01g01207 377 SUPERFAMILY ENTH/VHS domain 32 151 IPR008942 -
Tsu01g01207 377 PANTHER OS08G0467300 PROTEIN 1 340 - -
Tsu01g01207 377 Gene3D - 4 153 IPR008942 -
Tsu01g01207 377 Gene3D ANTH domain 155 308 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01207 Tsu-Chr1 11184935 11186068 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01207 01 11184935 11186068 Tsu01g01207 01 11184935 11186068 ECH