LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu01g01189	ATGGCAATGCCAATTGGAAATGCAGTAATGCCGGAGATAATGCATTTTCCGGCGATGTTTAATGGCGGTGAGATACAGTACCAGCATCAACAATGGTTTGTTGATGAGAGAGATACATTTATGAATTGGATTCGTAGTGAATTCGCAGCTGCGAATGCAATCATAGACTGTCTTGTTCAGCATTTAGGTGTTATTGGTGAGAGTGGTGAGTATGATGGTGTTGTTGGTGCAATTCAACAGAGGAGAGTTAATTGGAATCAGGTGCTTCTTATGCAGCAATACTATTCAGTTTCCGAGGTGGCGTATGCATTACAGCAAGTGGCGTGGAGGAGGCAGCAGAGGTTTACAAAGCCGGTTGTTAAGGAGTTTAGGAAGGTTAGGCAATGGCAAAAGTTTGAGGCTGCCAATGTTAAGGAAGGTTGTAATTCTACAGTAGATTATCATGGTAACAAAGTGAATTTCGCGGTTAAAGAGACTCGAGTAATTGACAAGAGTGAAGAACTTAAATTTGAGAACAACGTTGAAATCAAGGATGATATGAATTCACAGAATAATGAGCAAAAGAAAGATACTATAACAAATCAATCTGATGGCATTTTGAATAGACCTGACAATTCTCAAGGATCTCTTTCTAGCTCAGAATTTGAAGTTGCGTGTGTAAATGAAGGAACGACATCAAACTCTCAAGAAAATAATTCACATTCTatgcaaaatcaaaatcagaagGAGAAAGGTTCTACCATGGGAAAAACTTTCCTTTGCAACGAGTTTTTTGACGGGAAGATGgTGAATGTAGTTGATGGACTGAAGTTGTATGAAGATTTATTGGATAGTACTGAAGTTTCAGAACTCGTTTCGGTGGTCAATGATCTGAGGGTTGCTGGAAGAAGAGGACAATTTCAAGGAAGTCAGACATATGTTGTTTCTAAAAGGCCCATGAATGGGCATGGAAGGGAGATGATTCAGTTGGGTGTTCCCATTGCTGATGCTCCACCAGATCTGGACAATATGACAGCATCGACGAAAGAAAAGAATGTAGAATCTATACCTTCCGTGTTTCAAGATATTATTGAGCGTATGGAAGCCTCACAAGTGATGACTGTGAAGCCTGATGCTTGCATTGTCGATTTCTATAACGAGGGTGATCACTCAATGCCAAACAGTGTGCCGTCTTGGTTTGGAAGGCCTGTTTATATGCTTTTCCTGACTAAATGTGACATGACTTTTGGGAGAACAATTGTCTCAGACCACCACCCTTGGGATTATAGGGGCTCTCTCACGCTTTCTCTTGCACCCGGGTCCCTTCTAGTGATGCAAGGAAAATCAACTGATTGTGCTAAATATGCTATTCCTGCTATTAATAAACAACGCATACTTGTTACTTTCGTAAAGTCCCAGCCAATTGATGCTCAACGTCTTGCTTCGCCTGCAACATCACATTCGTCAGCTGCACCGATCAGAACTCCAAATCATCATCAGTTAGCTCCCAAGCATTATTCCGCTGTTCAAGTAACTGGGATACCGCCTGCTCCCTCCCTTCGCGCACCTCCAAAAAGCATGCAGCCATTGTTTGTGCCGACGCCAGTCGCACCTCCGATGCAATTTTCTACACCTGTGCCTATCCCACTTGGTTCTACAGGATGGAACGTGGCTCCTCCAAGGCACCCTCCTGCTCGAATCCTAGTTCCCGGAACAGGAGTCTTTCTCCCTCCACCTGGCTCGGCTAATTCATCTCAGCACTTTCAAGGTACCATAACTCCAACCGCGATAAAAGAAAATGGGAAATCAAAAGCAAATCCTAACTATACTAATGACTCACCAAAAGGTAAAATGGATGAAACTATGCAAAGGCAAGAATACAATCGAAATGCAGGTGGAGCTGAAGTTGAACAAGCTATAGTGGAAGAAGTGGAAAGCAATGGAGAAACTGTTGTAAGCCAATGA	1944	0.4223	MAMPIGNAVMPEIMHFPAMFNGGEIQYQHQQWFVDERDTFMNWIRSEFAAANAIIDCLVQHLGVIGESGEYDGVVGAIQQRRVNWNQVLLMQQYYSVSEVAYALQQVAWRRQQRFTKPVVKEFRKVRQWQKFEAANVKEGCNSTVDYHGNKVNFAVKETRVIDKSEELKFENNVEIKDDMNSQNNEQKKDTITNQSDGILNRPDNSQGSLSSSEFEVACVNEGTTSNSQENNSHSMQNQNQKEKGSTMGKTFLCNEFFDGKMVNVVDGLKLYEDLLDSTEVSELVSVVNDLRVAGRRGQFQGSQTYVVSKRPMNGHGREMIQLGVPIADAPPDLDNMTASTKEKNVESIPSVFQDIIERMEASQVMTVKPDACIVDFYNEGDHSMPNSVPSWFGRPVYMLFLTKCDMTFGRTIVSDHHPWDYRGSLTLSLAPGSLLVMQGKSTDCAKYAIPAINKQRILVTFVKSQPIDAQRLASPATSHSSAAPIRTPNHHQLAPKHYSAVQVTGIPPAPSLRAPPKSMQPLFVPTPVAPPMQFSTPVPIPLGSTGWNVAPPRHPPARILVPGTGVFLPPPGSANSSQHFQGTITPTAIKENGKSKANPNYTNDSPKGKMDETMQRQEYNRNAGGAEVEQAIVEEVESNGETVVSQ	647

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu01g01189	647	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED	1	632	IPR044842	GO:0003729\|GO:0006402\|GO:0032451
	Tsu01g01189	647	SUPERFAMILY	Clavaminate synthase-like	257	462	-	-
	Tsu01g01189	647	MobiDBLite	consensus disorder prediction	192	244	-	-
	Tsu01g01189	647	MobiDBLite	consensus disorder prediction	591	609	-	-
	Tsu01g01189	647	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN	1	632	-	-
	Tsu01g01189	647	MobiDBLite	consensus disorder prediction	591	614	-	-
	Tsu01g01189	647	Gene3D	-	253	473	IPR037151	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu01g01189	Tsu-Chr1	10993863	10998022	Tandem

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tsu01g01189	01	10993863	10998022	Tsu01g01189	01	10993863	10998022	ECH