Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01187 atGGCTGCAACATTCGTCTCTGGAATCTCTCTTCTTCAACCAAATCCATCACTTTCTCTCAAACCCCATCAATCTCCCCTCTTTCCTCAACAATTCCCCTCCTCAAATTTTCGTTTTGAGACGAAAAGGGCAAAAGGGGTTGTGCTGAAAGCTTCTTCTGGTGTATTGGAAGTGAATTCAAAGCAACCCATTTCAGCTAGAAAATCTAATGATCCAATTATTGTTATTGATAACTATGATAGTTTTACCTATAATCTTTGTcagTATATGGGTGAGTTAGGATTTCACTTTGAGGTCTACCGAAATGACGAGTTAACAGTGGAGGAGTTGAAAAGAAAAAATCCGAGAGGAGTGCTGATATCACCTGGGCCAGGAGAACCTCAAGATTCAGGCATATCTTTGCAAACAGTTTTGGAGCTTGGACCAATTGTACCTGTGTTTGGTGTGTGCATGGGATTGCAGTGCATGGGAGAGGCTTTCGGCGGGAAAATTGTTCGTTCACCTTATGGTGTGATGCATGGAAAAAGTTCTCTGGTTTATTATGACGAAAAAGGAGAAGATGGATTATTTGCTGGACTACCTAAtCCTTTCTTGGCTGCAAGATATCACAGCCTTGTAATTGAAAAGGAGAGCTTTCCTCATGAAGAGCTTGAGGTAACAGCATGGACTGAGGATGGTCTCATAATGGCTGTTCGCCACAAGAAATATCGGTATATGCAGGGAGTGCAGTTTCATCCAGAGAGCATCATAACCCCCGACGGCAAGAAGATTGTCCACAACTTTGTGAAGCTTATAGAGAAAAGGGAAGCTGGTGGTTCTTGA 822 0.4221 MAATFVSGISLLQPNPSLSLKPHQSPLFPQQFPSSNFRFETKRAKGVVLKASSGVLEVNSKQPISARKSNDPIIVIDNYDSFTYNLCQYMGELGFHFEVYRNDELTVEELKRKNPRGVLISPGPGEPQDSGISLQTVLELGPIVPVFGVCMGLQCMGEAFGGKIVRSPYGVMHGKSSLVYYDEKGEDGLFAGLPNPFLAARYHSLVIEKESFPHEELEVTAWTEDGLIMAVRHKKYRYMQGVQFHPESIITPDGKKIVHNFVKLIEKREAGGS 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01187 273 Gene3D - 71 264 IPR029062 -
Tsu01g01187 273 CDD GATase1_Anthranilate_Synthase 73 262 IPR006221 -
Tsu01g01187 273 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 115 129 - -
Tsu01g01187 273 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 145 161 - -
Tsu01g01187 273 PRINTS Glutamine amidotransferase superfamily signature 145 156 - -
Tsu01g01187 273 PRINTS Glutamine amidotransferase superfamily signature 241 254 - -
Tsu01g01187 273 PRINTS Glutamine amidotransferase superfamily signature 118 127 - -
Tsu01g01187 273 PRINTS Anthranilate synthase component II signature 73 87 - -
Tsu01g01187 273 PRINTS Anthranilate synthase component II signature 118 127 - -
Tsu01g01187 273 PRINTS Anthranilate synthase component II signature 171 179 - -
Tsu01g01187 273 PRINTS Anthranilate synthase component II signature 194 206 - -
Tsu01g01187 273 PRINTS Anthranilate synthase component II signature 145 156 - -
Tsu01g01187 273 PRINTS Anthranilate synthase component II signature 241 254 - -
Tsu01g01187 273 SUPERFAMILY Class I glutamine amidotransferase-like 73 267 IPR029062 -
Tsu01g01187 273 TIGRFAM trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 73 263 IPR006221 -
Tsu01g01187 273 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 72 271 - -
Tsu01g01187 273 PANTHER ANTHRANILATE SYNTHASE BETA SUBUNIT 1, CHLOROPLASTIC 49 271 - -
Tsu01g01187 273 Pfam Glutamine amidotransferase class-I 75 262 IPR017926 -
Tsu01g01187 273 PANTHER MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED 49 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01187 Tsu-Chr1 10961564 10965299 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01187 01 10961564 10965299 Tsu01g01187 01 10961564 10965299 ECH