Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01180 ATGCAAGAGGCagctattttgtttgataaagagctGAGAGTGGCTGTTGAAAATATTGTGGTTGGGGGAGGTCCGTTCTTTGGAGACTTTCAATGGAGAATCACTTCTTTACCCATTAAGTTTGGAGGATTAGGATTGTATTCAGCTGTAGAGGCCAGCTCATATGCCTTTGTGGCTTCCAGGGCCCAATCTTGGGTTAAGTATGCTTCCGATCTTGTCTCTCGAGCAGGTCTCACTGattgtaaaattaaaaacactccTCTGGAACCGAACGTTCGGTTTACTCCTCAAGATGGTACTTTACTTGATGATGCCACTCTTTATCGGCAACTCGTAGGTAGTCTGATATACCTCACGGTTACTCGGTCGGATATTTCACATGATGTTCATCTTGTTAGTCAATTCATGTCTTCTCCTCGTACCACACATTATGCTGCTGTCCTTTGGATTATACGGTATATCAAAGGTTTGGCTCATTTGTTTGGCATCATATCAATCATACTCTTACTTGTTTGGTTGGTGCATTACCGCGAGGGGATCGACTATGATTCCGATGATGGATTACGCGTCtttgatGTACACCCTTTAATGATGTTCTTGGGCTTTATTTTCCTTGTTGGTGAAGCAATTATGGCATTCCAAACGGTACCAGGAGAAAGACAAAAAGGAAAGTTTGTTCATATGACACTTCACTTGATTGCAATTGTTTTAGGCATAGTTGGTTTGTGTGCTGTTTTCAAATTCCATAATATGAGAAACATTGCAGATGTTTATAGCCTTCATTCATGGATTGGTCTTAGCACCTTCTGCTTGTTTGGTTTGCAGTGGCTATTTGGTTTAATTACATTCATGTTTCCTGGAGCACAAGCTCCAACAAGAGAAAGAGTGCTTCCATGGCACAGAGCATGTGGTAGAGTTTTACTTTTCATGGCAATTTGTGCTGCAGAAACAGGATTGATGGAGAAGGCTGGTTTCTTGGATCTCAAGCCATATCATAGAGAAACTAACTTGGTCAATTTTACAGGTCTTTCAATTCTCTTGTTTGGAGTTTTTGTCAGCATGTCTGTTGGTGTTCGTTAA 1080 0.3972 MQEAAILFDKELRVAVENIVVGGGPFFGDFQWRITSLPIKFGGLGLYSAVEASSYAFVASRAQSWVKYASDLVSRAGLTDCKIKNTPLEPNVRFTPQDGTLLDDATLYRQLVGSLIYLTVTRSDISHDVHLVSQFMSSPRTTHYAAVLWIIRYIKGLAHLFGIISIILLLVWLVHYREGIDYDSDDGLRVFDVHPLMMFLGFIFLVGEAIMAFQTVPGERQKGKFVHMTLHLIAIVLGIVGLCAVFKFHNMRNIADVYSLHSWIGLSTFCLFGLQWLFGLITFMFPGAQAPTRERVLPWHRACGRVLLFMAICAAETGLMEKAGFLDLKPYHRETNLVNFTGLSILLFGVFVSMSVGVR 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01180 359 Gene3D - 151 358 - -
Tsu01g01180 359 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 3-RELATED 154 358 - -
Tsu01g01180 359 Pfam Eukaryotic cytochrome b561 193 325 IPR006593 -
Tsu01g01180 359 ProSiteProfiles Cytochrome b561 domain profile. 157 357 IPR006593 -
Tsu01g01180 359 PANTHER CYTOCHROME B561-RELATED 154 358 IPR043205 GO:0016491
Tsu01g01180 359 SMART 561_7 193 319 IPR006593 -
Tsu01g01180 359 CDD Cyt_b561_ACYB-1_like 184 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01180 Tsu-Chr1 10931162 10938944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01180 157 358 Chloroplast and Mitochondria Gene Families AT1G14730 53.960 5.39e-76 232
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01180 01 10931162 10938944 Tsu01g01180 01 10931162 10938944 ECH