Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01152 atgataataatcaGATCGAGAAATTTGAAACGGAAGCTTACACAGGAAGCACCATTGCACGTCGTCAGCAAGAAGCTCCGGTCAAAAATTCCTCGCAGGAGAAGACGTCAGATCTCACCGGTGCTAATTGTTTCACCGAGATTCAAAGTTCATGGAGAGAATCGGAATTTCTCTGTTATTTCAGTTGATTCCAGTTCGAGCTCCGGTTCGGATTTCGCCGGCGGCGAAGTTTCAGTTTCAGTTTCGTGTGATTCGAGTAGAGTTTCTGCTGTTTTGTCTGGTAAAGGAAGAACGAGATCGATAAATGAGATTTCAAGCGGTGTTGAATGTGTTCCAAAGGGAGAATGTGTGAGTCTGTTGGGGAATCGGAGATTTGAGAAACGGAATGAAAACGAAGTGGAAGTTTCGGAGAATTCGTGTGTGGATTCTAATTCTGGAGTTCGTGATCGGAGTAGAAGCTTGATTTTGAAGTTCAAGAGTGGAAAAGTGAACGATGAAGTTTCGGAAGTTACTTTTGCGGAGAATTCAAAATCGAGTAACGGTAATTTGAATATCTCGTCGGAGATAACACGAAACGATGTCGTTTCAGTTAGTTCTGGTGCTCGAGAAGCTTCGTTTATGGAGGAGAAGAGTAAAATCATGGAAAACAGAGCATCGGAATCTGAATTCTCTCAAATTTCGAGAAACCGTAACGCTGATGAGAATAGTACCGATTTGATAGCGCAATCGATTATTAAGAATTGTTCGGATAATTCAGGTTACGATTCCGATCTAGCTTGCTCTGAGCAATTCAACGACGATGATGATTCAGAGTATTATTCAAGTCAGGGAACTACATTCTCTGATCTTCACTCCGAGATTTTCGGCGAATGTTCCGATTACAGTCCGTCTCAGTTCCTTGATTCCGGAAGCCAGTTTTCGCAAGGATCCGTTGGTGAAACTCCTTCACACACTTATTCATTGTTCCTTCAATACCGCGACGAATTCATGATGCTAGATTCTCCAGTTAATAATACTTCAAGTGTTGAAGATGTTTCTCTTCAACGCAATTTTTCAAGGTTTGAAGACTTGGATGATGAAGACAGTTACCAGATGCTTAGAAAGAGAGAACGGAGACAAGTTTTCATGTGGAATTATGCTGAAAGATATTTCTCTACAACGAAATTCACCGACCTTGTGTTTCAGCAACGCTCAAAAATGGTTCACTGGATCATTGAGCAATCTTATCGGAAACAACTACGACAAGAGACAATGTTTCTTGGAATCAACCTACTTGACCGTTTCTTGAGCAAGGGATACTTCAAAGCAGAAAGAAACCTTCAAATTGTTGGAATAGCCTGCCTTACATTGGCAACTAGAATTGAAGAAAACCAGCAATATAACAGAGTGGGGCAAAAAACTTTCTACATAGAAAAAAGTGCGTACAGTAGATGCGAAGTTGTGGCTATGGAATGGATGGTGCAAGAGGTCCTCGAGTTCGAGTGTTTTCATCCAACCATCTACAATTTCTTGAGTTTCTACCTAAAAGCTGCTAATGCTGATGCTGTTGTGGAGAAAAGGGTCACGTGCCTAGCATTACTTGCTCTAGCAGGTCCTGGTCAGCTGTGTTACTGGCCCTCAACTATTGCCGCTGCAGTTGTAATCCTGGCTTGTCTAGAACTCAATCAGAAAGCATCCCACAAAATCATAGGGATCCACATTAGATCAAAGGATGAGAATCTGCACGAATGCATGGAGAGTCTGGAATGGTTGTTACGCTATCTATGA 1767 0.4171 MIIIRSRNLKRKLTQEAPLHVVSKKLRSKIPRRRRRQISPVLIVSPRFKVHGENRNFSVISVDSSSSSGSDFAGGEVSVSVSCDSSRVSAVLSGKGRTRSINEISSGVECVPKGECVSLLGNRRFEKRNENEVEVSENSCVDSNSGVRDRSRSLILKFKSGKVNDEVSEVTFAENSKSSNGNLNISSEITRNDVVSVSSGAREASFMEEKSKIMENRASESEFSQISRNRNADENSTDLIAQSIIKNCSDNSGYDSDLACSEQFNDDDDSEYYSSQGTTFSDLHSEIFGECSDYSPSQFLDSGSQFSQGSVGETPSHTYSLFLQYRDEFMMLDSPVNNTSSVEDVSLQRNFSRFEDLDDEDSYQMLRKRERRQVFMWNYAERYFSTTKFTDLVFQQRSKMVHWIIEQSYRKQLRQETMFLGINLLDRFLSKGYFKAERNLQIVGIACLTLATRIEENQQYNRVGQKTFYIEKSAYSRCEVVAMEWMVQEVLEFECFHPTIYNFLSFYLKAANADAVVEKRVTCLALLALAGPGQLCYWPSTIAAAVVILACLELNQKASHKIIGIHIRSKDENLHECMESLEWLLRYL 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01152 588 SUPERFAMILY Cyclin-like 498 585 IPR036915 -
Tsu01g01152 588 PANTHER CYCLINS 5 579 IPR039361 -
Tsu01g01152 588 SMART cyclin_7 402 489 IPR013763 -
Tsu01g01152 588 PANTHER CYCLIN-SDS 5 579 - -
Tsu01g01152 588 CDD CYCLIN 397 456 IPR013763 -
Tsu01g01152 588 Pfam Cyclin, N-terminal domain 382 494 IPR006671 -
Tsu01g01152 588 Gene3D - 376 490 - -
Tsu01g01152 588 ProSitePatterns Cyclins signature. 397 428 IPR006671 -
Tsu01g01152 588 Gene3D - 491 587 - -
Tsu01g01152 588 Pfam Cyclin, C-terminal domain 498 582 IPR004367 -
Tsu01g01152 588 SUPERFAMILY Cyclin-like 357 494 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01152 Tsu-Chr1 10682296 10686646 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01152 361 529 Core Cell Cycle Gene Families AT1G76310 33.136 1.86e-19 88.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01152 01 10682296 10686646 Tsu01g01152 01 10682296 10686646 ECH