Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01145 ATGGTTTCAAGATCTTATTCAAATCTAGTAGAGTTAGCTTCTGGTGAAACTCCATCATTTGGTTTAATAAACAGAAGAATTCCAAGGATTATGACTGTTGCTGGTTTGATATCTGAtgttaatgttgatgatgatcaaGTGGAGAGTGTGGCTTCTGATCTATCGTCTTCTTCGGTTCACCGTGACCGAATCATAATTGTGGCTAATCAGCTTCCTATAAAGGCTCAAAAGAATCAAGATGGTAATAGGAGTTTTTGGTCTTTTGATTGGGATGAAGATTCACTACTTCAATTGAAAGATGGAATAGGTGATGAAGATATTGAGGTTATTTATGTTGGTTGCTTAAAAGAAGATGTTCCTTTAAATGAACAAGATGAGGTTTCAATGATACTTCTTGAGAATTACAAATGTGTCCCTACTTTTCTTCCACCTGAGATGTTTACTAAGTACTATCATGGTTTTTGCAAACAACAATTATGGCCACTTTTTCATTACATGTTACCTTTGTCGCCGGGACTCGGTGGTAGGTTTAATAGGTCTTTGTGGCAAGCTTATGTATCTGTTAATAAGATTTTTGCTGATAGGATTATGGAAGTTATTAACCCTGAAGAtgattatgtttggatacatgATTATCATCTTATGGTGTTACCGACTTTCTTGAGGAAGAGATTTAATAGGGTGAAACTTGGATTTTTCCTTCATAGTCCATTTCCTTCATCAGAAATCTACAAAACATTGCCTATTAGGGAGGAGCTCTTGAGAGCTTTACTTAATTCCGATTTGATCGGATTTCATACTTTTGATTACGCACGGCATTTCCTCTCGTGTTGCAGTCGGATGTTAGGTCTTACCTATGAATCGAAGCGAGGGTATATTGGGATTGAGTATTATGGTAGGACAGTTAATATCAAGATTCTTCCTGTTGGTATACATATGGGTCAGATTCAATCGGTTTTAAGGCTGCGAGAAACCAAGGAAAAAGTTTGCGAGCTCATTCAACAGTTTTCTGATCAAGGTAGGACAATGTTGCTTGGTGTGGATGATATGGATATATTTAAGGGGATAAGTTTGAAGCTTTTGGCCATGGAGCAACTTCTTGTTCAGCATCCCGAGTATCGAGGAAAAGTGGTATTGGTTCAGATAGCGAATCCTGCTAGGGGACGAGGGAAAGATGTGAAAGAAATGCAAGATGAGACAAAGGCGACGGCAAAACGGGTCAACGAAACATTTGGGAGACCAGGGTATGATCCTGTTATTTTGATTGAGAAGCCGTTGAAGTTTTATGAGAGAGTTGCTTACTATGTTGTTGCCGAGTGTTGTTTAGTCACTGCAGTAAGAGATGGAATGAATCTCATACCGTACGAATATATAGTCGGTCGTCAAGGAAATGAAACATTGGATAAAGTTTTGAAAGTAGGCTCCTCCCCTAAGAAAAAGAGCACATTAGTTGTGTCTGAATTCATCGGCTGTTCTCCATCTTTAAGTGGAGCAATCAGAGTGAACCCGTGGAATATCGATGCTGTGGCCGATGCGATGGATTCTGCATTAGGAATGGCTGATTCAGAAAAAGAGCTTCGGCATGAAAAGCATTATAGATATGTTAGTACTCATGATGTCGGGTATTGGGCTCGGAGCTTTTTACAAGATTTAGAAAGGGCTTGTTGTGATCATGTACGACGAAGGTGGTGGGGAATTGGCTTTGGATTAAGTTTTAAAGTCGTAGCACTCGACCCAAACTTTAGAAAGCTCTCGATGGATCACATAGTTTCGGCTTACAAGCGGACAACAAATAGGGCTATTCTTCTAGACTATGATGGTACACTAATGCCTCAGGTTTCCATTGATAAGAGTCCAATAATTAAATCTATTGAAATTCTTAATAGCTTGTGTAAAGATAAGAACAACGTGGTGTTTCTTGTTAGTGCCAAAAGCCGAACGACGCTCTCTGAATGGTTTTCTCCTTGCGAGAATCTGGGAATCGCGGCCGAACACGGCTACTTTCTGAGAATGAAGCGAGACGACGAATGGGAAACTTGTGTTCCTGCAACAGATTGTAGTTGGAAACAAATTGCAGTGCCTGTTATGAAACTTTATACTGAAACAACTGATGGATCCACCATTGAAGATAAGGAGACTGCACTTGTTTGGTGTTATGAAGATGCAGATCCAGATTTTGGATCATGCCAAGCTAAGGAACTTCTCGATCATCTCGAGAGTGTTCTGGCAAATGAACCTGTAACTGTCAAAAGTGGTCAGAATTATGTTGAGGTTAAACCACAGGGTGTGAGCAAGGGATTAGTGGCGAAACGCCTACTTTCATCTATGGAAGAAAAGGGAATGTCACctgattttgttttgtgtatAGGAGATGACAGATCTGATGAAGATATGTTTGAGGTTATCACGAGTTCAATGAACGGTCCAATAGCGCCGAAAGCTGAAGTATTTGCTTGCACCGTTTGTCGGAAACCGAGTAAGGCTAAGTACTATCTTGATGATACTGCTGAAATAGTGAGATTGATTCAAGCATCGAGGATGGTTAAAGGTAAAACAATTCAGCTGTCCGGACTCCCTTCTTCTGTGAATGTGTCTGATGTAAAGAGATTTGTAGAGAAGTATACCGGTGAAGGAAGTATCGATGCTATGAAGATAAGAGTAGGAAAAGGCCGTGTAGCGTATGCTATTATTCAATTCACTAATGCAAAGCATGCTACATACATGATATCCTTATCTAACAGAAGTTTGTCAACATTGTGTTTCGATGATGTGAAGCTGCATTTTGGCTGTCCGATCTCAAAGGAGAGATTCTCCGTTTTATGGAGAGAGGTGGATGTTCGTGTAGAGTTTGGGAATGAAATGAGAAAGTGGCGATTCATCATTAGCCATGATGATAAAAATCTCAAACTTGAGCTTTCATATGAAAACATTTGGAACATTGAGCTGCATCGACCGCATGACGAAACTGCAAACTATCTTCTGATTCAGTTAATTGGTGCTCCTCGTGTTTTTGAGCTTTACATTCCTACTTCGGTTGATGTATATAAAGATCCTTTGAAGAAGAATTATAAGAATTATTATAAAGATTCCCCTGATGAGCAATGGATCCGTTCGACAGATTTCACTCCTTTCAGTTGTATTGGGCAGTGTTCTGCTTTATGTCTAGAGCTTCCTAGTAACGAAGGTTTTCCAAATTTGAGGGGAAACTTTGTCAATTATGAGGAAATCGAGGGGCGATACACTTTGGAGAACGGATCACCTTTTTCTCGCAATCTGGATGTTGTCCCTATTGTTTCTCCTCCTCAAGGCATTTGTATTCCAtatcatattttgtttaaagTTAATTCGTTGGTGCAACACGGTTGTGTTTCAGGTTCTGAACTTGATGATGATTTCTATCGTCTAGTTGATCCACTTAGAATAAATATTGAGTTTATCGAGCATGCTTTGGAAAAGATGTACTATTCAAAGGATTTCTGTTATGAACCCGCAAAATGGCTGAAAGACCAGTACAGAATGTATCTTAATTCAAATAATCCGCCTCGGTCCCCCACTATATCTTTGGATGACGGGTTGGCATATGTTCACAGGGTTCTGATAACACCTTGCAAAGTATACTTTTGTGGTCCAGAGATTAATGTCTCGAATCGTGTTCTACGTAGTTTCCCTAGATATATTGATAACTTTCTACGTGTTTCATTTGTTGACGAGGAGTTTGATAAACTACATTCAGCAGATTTATCTTCACGCATTTATGAGAGTGGGAGAACTGCGATATACTATAGAATTCTTTCCATCATAAGAAATGGCCTAGTTATTGGTGAAAAGAAGTTTGAATTTCTAGCTTTCTCATCAAGTCAGTTGCGAGAAAATTCGCTATGGATGTTTGCTCGTGCAGCAAATTGGCTTACAGCCGAAGGCGTAAGGTATTCTATGGGAGATTTTAGCCAGATAAGAAATGTAGCTAAATATGCTGCAAGGCTCGGACAATCTTTTGGTTCGTCTACCGAAACTCTAAACCTTACCAGGAATGAAACTGAAATGATTACTGACGTGAAGGTTAAGCATGGTGCAATCGAATATGTCTTCTCTGATGGAATCGGGAAAATATCTCTTGAACTTGCCAAGACAGTGGCTAAAATATGTGGTTATGATTCTATGCCATCCGCCTTTCAGATTCGGTATGGCGTATTCAAAGGAGTTGTGGCTGTTGATCCAACCTCATCAGTGAAGTTGTCACTGAGGAAGAGCATGCAGAAGTTTAAGTCGAATATCATAGAATTGGATGTTTTGGCATGTAGTAAGTTTCAGTCTTGTTATCTGAATCGTCAGTTGATTACTCTCTTATCCACTCTCGGTGTCAGGGACGGTGTTTTCGAGAAAAAACAGAAAGAAGCTGTTGAACAACTGAACACAATGCTAACAGATTCAACAAAAGCGCACGAGGTTTTGGACTTGATGTTTTTCGGGGAGGTCACTAATATTCTGAAGGAGATGCTTATTTGTGGTTACAAACCTAATGTTGAACCATTTCTTTCGATGATGCTGCAGACATTTAGGGCATCAAAACTGTTGGAATTGCGACAAAAAACTAGGATATTTATTCCAAAAGGAAGATTAATGATGGGAGTTCTAGATGAAACAAGAACCCTAGAATATGGTGAAGTTTTTGTTCAATATTCTATCAATAGGCTCAGCAGTAGTCTTTCTCATGTTGTTAAAGGCAAGGTTGTAGTAGCGAAAAATCCCTGCTTGCACCCAGGCGATGTTCGTGTTTTGAAGGCTGTGGTGGTGCCAGCTTTGCGCCACATGGTGGATTGTGTTGTATTCCCTCAAAAAGGTCACAGGCCGCATCCAAATGAATGTTCGGGAAGTGATCTAGACGGGGACATCTACTTTGTTTGTTGGGATTCTGAATTGATTCCACCTAGAACAATTGAACCAATGGAGTATGATTCTGCCAAACCTATTGTATTGGATCATGATGTCAAAATTCAGGAGGTGGAGGACATTTTAccaatttcatatttaatgACAGGCTTGGAATAA 5049 0.3918 MVSRSYSNLVELASGETPSFGLINRRIPRIMTVAGLISDVNVDDDQVESVASDLSSSSVHRDRIIIVANQLPIKAQKNQDGNRSFWSFDWDEDSLLQLKDGIGDEDIEVIYVGCLKEDVPLNEQDEVSMILLENYKCVPTFLPPEMFTKYYHGFCKQQLWPLFHYMLPLSPGLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGIEYYGRTVNIKILPVGIHMGQIQSVLRLRETKEKVCELIQQFSDQGRTMLLGVDDMDIFKGISLKLLAMEQLLVQHPEYRGKVVLVQIANPARGRGKDVKEMQDETKATAKRVNETFGRPGYDPVILIEKPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVGRQGNETLDKVLKVGSSPKKKSTLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALGMADSEKELRHEKHYRYVSTHDVGYWARSFLQDLERACCDHVRRRWWGIGFGLSFKVVALDPNFRKLSMDHIVSAYKRTTNRAILLDYDGTLMPQVSIDKSPIIKSIEILNSLCKDKNNVVFLVSAKSRTTLSEWFSPCENLGIAAEHGYFLRMKRDDEWETCVPATDCSWKQIAVPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNYVEVKPQGVSKGLVAKRLLSSMEEKGMSPDFVLCIGDDRSDEDMFEVITSSMNGPIAPKAEVFACTVCRKPSKAKYYLDDTAEIVRLIQASRMVKGKTIQLSGLPSSVNVSDVKRFVEKYTGEGSIDAMKIRVGKGRVAYAIIQFTNAKHATYMISLSNRSLSTLCFDDVKLHFGCPISKERFSVLWREVDVRVEFGNEMRKWRFIISHDDKNLKLELSYENIWNIELHRPHDETANYLLIQLIGAPRVFELYIPTSVDVYKDPLKKNYKNYYKDSPDEQWIRSTDFTPFSCIGQCSALCLELPSNEGFPNLRGNFVNYEEIEGRYTLENGSPFSRNLDVVPIVSPPQGICIPYHILFKVNSLVQHGCVSGSELDDDFYRLVDPLRINIEFIEHALEKMYYSKDFCYEPAKWLKDQYRMYLNSNNPPRSPTISLDDGLAYVHRVLITPCKVYFCGPEINVSNRVLRSFPRYIDNFLRVSFVDEEFDKLHSADLSSRIYESGRTAIYYRILSIIRNGLVIGEKKFEFLAFSSSQLRENSLWMFARAANWLTAEGVRYSMGDFSQIRNVAKYAARLGQSFGSSTETLNLTRNETEMITDVKVKHGAIEYVFSDGIGKISLELAKTVAKICGYDSMPSAFQIRYGVFKGVVAVDPTSSVKLSLRKSMQKFKSNIIELDVLACSKFQSCYLNRQLITLLSTLGVRDGVFEKKQKEAVEQLNTMLTDSTKAHEVLDLMFFGEVTNILKEMLICGYKPNVEPFLSMMLQTFRASKLLELRQKTRIFIPKGRLMMGVLDETRTLEYGEVFVQYSINRLSSSLSHVVKGKVVVAKNPCLHPGDVRVLKAVVVPALRHMVDCVVFPQKGHRPHPNECSGSDLDGDIYFVCWDSELIPPRTIEPMEYDSAKPIVLDHDVKIQEVEDILPISYLMTGLE 1682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01145 1682 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 851 IPR001830 GO:0003824|GO:0005992
Tsu01g01145 1682 SUPERFAMILY HAD-like 599 846 IPR036412 -
Tsu01g01145 1682 Gene3D Glycogen Phosphorylase B; 55 317 - -
Tsu01g01145 1682 TIGRFAM T6PP: trehalose-phosphatase 598 842 IPR003337 GO:0003824|GO:0005992
Tsu01g01145 1682 CDD GT20_TPS 63 552 IPR001830 GO:0003824|GO:0005992
Tsu01g01145 1682 Pfam Trehalose-phosphatase 602 835 IPR003337 GO:0003824|GO:0005992
Tsu01g01145 1682 Gene3D Glycogen Phosphorylase B; 318 536 - -
Tsu01g01145 1682 CDD RRM_SF 853 913 - -
Tsu01g01145 1682 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 601 802 IPR006379 -
Tsu01g01145 1682 SUPERFAMILY RNA-binding domain, RBD 845 913 IPR035979 GO:0003676
Tsu01g01145 1682 Pfam Glycosyltransferase family 20 63 552 IPR001830 GO:0003824|GO:0005992
Tsu01g01145 1682 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 851 - -
Tsu01g01145 1682 CDD HAD_TPP 600 840 - -
Tsu01g01145 1682 Pfam RNA dependent RNA polymerase 1200 1671 IPR007855 GO:0003968
Tsu01g01145 1682 Gene3D - 598 726 IPR023214 -
Tsu01g01145 1682 Gene3D - 727 854 IPR023214 -
Tsu01g01145 1682 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 62 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01145 Tsu-Chr1 10582589 10594676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01145 1 844 Trehalose Biosynthesis Gene Families AT1G68020 80.186 0.0 1427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01145 01 10582589 10594676 Tsu01g01145 01 10582589 10594676 ECH