Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01141 ATGTGTAAGACAATTCAGATACATGGATTCCCATCTAATGTTTCTGCTGAAGAGGTAACAAAATTTTTGGAACAACATGCTGGTTTCCAAACTGTTCTTGCTGTCAAGATTGAGCAGCATAAAGATGAAGATTCTATGACACATGTTAAAGTTCaattcaaagacaaaaaaaGTGTTGAAACAATCTTAGACTTGGTTACCAATAAACACTTGTCTTACATTAACAATGTTTTAAATGCTACATTAATAAAACCTGACATTTTGTCAAAGCCAAGAATCTTTGCTTACAATATGGATGGTATTGGAATACACTTTGGTTGTCAAACATCTAAGGGAAAACTTAGTGTGTTATGGGAACATTCAAATGCTTCTGTTAAATTTGAAGCCAGATtgagaaaaatgtatatattttttcactATTTGTCTAAGGATTATAAGCTGCAGATCAATTCCGAGAGTATATCGCGAATTGAGCTGCATCACTCGCAATGTCGTACCAAGAAGCTTCTCCTTTTTCAGTTACGCAGCGCTCCTCGGATTTACGAGAAAGATGTTTCCGAAGTCAAGTACTTTAAGGAAGCTTATGACAACCATTGGTTTAGAAGTGTAGATTTCACCTCTTCATGCTGCATCGGACAATCATCAGCTTTGTGTTTTGAGCTTTCACAAAGTACTGAGGTTCCGAATTTTTGTCACCACTATCGAAATTATTACAAATTCGATGACACCTTTGATCTTGAAAAACAACTTGGTTTCtcatcaaaatttgattttgtccCCATGGTGATTCCACCAGAAGGATTCAACTTGCCATACAAATTTCTGTTCAAAATCAACTCATTAGTTCAACATGGTTGCCTTCCTTTGCAAGCAATCGACACCGACCTTTTTCATATGGTTGAtccaaaaagaataaaagctgAATATATAGAAAGTGCTTTGGATAAATTACATATGATGAAAGAATGCTGCTATGAACCTGTTCAATGGTTGGAGAAACAATATCAGCGATACTCGAAAAATAGTTCACTTCCATTATCTAGTACCATTTCATTAGATAATGGTTTGGTCTATGTTCATAGAGTACAAGTAACTCcatccaaaatatatttttgtggtCCGGAAGTGAATCTTTCGAATAGAGTTTTGCGCAACTTTCCTAAAGACACTGATAACTTCCTTCGTGTTTCTTTTGTTGATGAGAACATGGATAAACTCCGTTCGTCCGATTTTTTGTCGCAATCCTCTTGTATAGAAGTGGACAGAGAAACAAAGGTTCATAAAAGAGTACTGTCTACACTAAAAAACGGCATAGAAATCGGTGACAAGAAGTTTGAGTTTCTTGCTTTCTCATCAAGTCAACTACGTGATAACTCGGCATGGATGTTTGCATCAAGAAAAGGACTAACCGCGTGTGATATAAGAAAATGGATGGGAGATTTTAATGAAATTAGGAATGTAGCAAAATATGCAGCAAGACTTGGTCAATCATTCAGTTCTTCAAGGGAAACGGTTAGTGTTGAAAGACACGAAATCGAAATCATTCCTGATATAGAATTGATAAGAGGTGAAAGCAAATATTGTTTCTCTGATGGAATAGGGAAGATATCTTACGAATTGGCTCAAGAAGTTGCTAAAAAATGTGGCTGCAAAGATCAGATTATTCCATCTGCATTTCAAATAAGATATGGTGGTTACAAAGGTGTTGTTTCTATTGATCCTAATTCATCAACAAAGCTTTCCTTGAGAAATAGCATGTGCAAGTTTAAGTCAGAAAACACAAAATTAGATATATTGTCATGGAGCAAAAACAAACCGTGCTTTCTTAACCGTCAAGTAATCGTTCTCTTGTCCACGCTCGGTGTCAAGGATCGAGTCTTTACAAGGATGCAAAGGGAGATTGTTAAAAAACTCAAAATGATATCAAGAAAACCATTCATTGCACTAGACATGATGTCACAAGGAGAGATTACAAACATGTTaagggaaatgcttatttgtGGATTCCATCCAAAAAATGAACCTTTTCTTTCCATGATGTTGAAAACAATATGTGCATCAAAGTTACAAGAATTACAGCTCAAAACTAGGATATTTGTCAGGAAAGGAAGAGCAATGTTAGGATGCTTGGATGAAACTAGGACATTAAAATATGGAGAGGTATTTGTGCAAACATCTCTTTCTTCTAAGGGCATTGGAGCAAAACAAGGAACACATATTGTTAAGGGGAAGGTAGTTGTAGCAAAGAATCCATGTCTACATCCAGGAGATGTAAGGATTTTGAGAGCAGTTGATGTACCTTCCTTACATCATATGGTAGATTGTGTTGTTTTCCCACAGAAAGGGAGAAGACCACATCCTAATGAATGTTCAGGAAGTGACTTGGATGGAGATATCTACTTTGTCTGTTGGGACCCTGCTCTTATTCCTCCTCATCAGGAAAGTCCAATGGATCATTCACCCTCTAAAGTCATGAATGTGGATCATGATGTCACTTTACAGGATGTAGAGGAACATTTCACTCACTACATTGTTAAAGACACCTTAGGAATGATTGCAACTGCACACACTGTGTTTGCTGATAAGGATGCAGAAAAGGCAATGAGCCTTTCATGCATAGAGCTTGCAAAACTACACTCAATAGCCGTCGATTTTGCAAAATCCGGTGTCCCGGCTGAAATACCACAACATCTACAAGTGGATAAGTATCCAGATTTCATGGAAAAGCAAAACAAACCAACTTATCAATCAAACAACATAATCGGAAAGCTTTACCGCGAGGTTAAGAATGTTGCACAACATAACAGCcacaaaaaatcattcactAGAAAAACTGCATTGAAGTTATATGATCATGACATGAAAATTGATGGTTTTGAAAACTACACAAAAATTGCTTGTGAATACAAACACATGTATGATACCAAGTTATTGAACTTAATGGATTACTATGGTATAGAAACAGAAGCAGAAATAATTAGTGGAAATATCTTAAAGATGTCAAAATCTTTTAATGATAGAAAAGATAAAGAAGGAATAAATCATGCTGTGATGTCATTAAGGAATGAAGCTAGAGATTGGTTCAATGAGatgataagaaaatcaaattctgaatatggtgatgatgatgattcttaTGCTACAGCTTCTGCTTGGTATTATGTAACATATCATCCTAGTTATTGGGGATGCTATAATGAGGGGCTAAATAAGGATCATTTCCTAAGTTTTCCATGGTGTGTTTATGATATTCTCATTCAAATAAAGAAGGACAAAGCCAATAGTAGAGCTCATGAAATGAAGGTTTGGACAACACTTAATATGTTTCTCATCACAATAATGTTTTGCATCTTATTGGGGATAATAGTGCATTATCGTAATAAGAGTTTGTATAggtaa 3399 0.3419 MCKTIQIHGFPSNVSAEEVTKFLEQHAGFQTVLAVKIEQHKDEDSMTHVKVQFKDKKSVETILDLVTNKHLSYINNVLNATLIKPDILSKPRIFAYNMDGIGIHFGCQTSKGKLSVLWEHSNASVKFEARLRKMYIFFHYLSKDYKLQINSESISRIELHHSQCRTKKLLLFQLRSAPRIYEKDVSEVKYFKEAYDNHWFRSVDFTSSCCIGQSSALCFELSQSTEVPNFCHHYRNYYKFDDTFDLEKQLGFSSKFDFVPMVIPPEGFNLPYKFLFKINSLVQHGCLPLQAIDTDLFHMVDPKRIKAEYIESALDKLHMMKECCYEPVQWLEKQYQRYSKNSSLPLSSTISLDNGLVYVHRVQVTPSKIYFCGPEVNLSNRVLRNFPKDTDNFLRVSFVDENMDKLRSSDFLSQSSCIEVDRETKVHKRVLSTLKNGIEIGDKKFEFLAFSSSQLRDNSAWMFASRKGLTACDIRKWMGDFNEIRNVAKYAARLGQSFSSSRETVSVERHEIEIIPDIELIRGESKYCFSDGIGKISYELAQEVAKKCGCKDQIIPSAFQIRYGGYKGVVSIDPNSSTKLSLRNSMCKFKSENTKLDILSWSKNKPCFLNRQVIVLLSTLGVKDRVFTRMQREIVKKLKMISRKPFIALDMMSQGEITNMLREMLICGFHPKNEPFLSMMLKTICASKLQELQLKTRIFVRKGRAMLGCLDETRTLKYGEVFVQTSLSSKGIGAKQGTHIVKGKVVVAKNPCLHPGDVRILRAVDVPSLHHMVDCVVFPQKGRRPHPNECSGSDLDGDIYFVCWDPALIPPHQESPMDHSPSKVMNVDHDVTLQDVEEHFTHYIVKDTLGMIATAHTVFADKDAEKAMSLSCIELAKLHSIAVDFAKSGVPAEIPQHLQVDKYPDFMEKQNKPTYQSNNIIGKLYREVKNVAQHNSHKKSFTRKTALKLYDHDMKIDGFENYTKIACEYKHMYDTKLLNLMDYYGIETEAEIISGNILKMSKSFNDRKDKEGINHAVMSLRNEARDWFNEMIRKSNSEYGDDDDSYATASAWYYVTYHPSYWGCYNEGLNKDHFLSFPWCVYDILIQIKKDKANSRAHEMKVWTTLNMFLITIMFCILLGIIVHYRNKSLYR 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01141 1132 PANTHER RNA-DEPENDENT RNA POLYMERASE 2 1116 IPR007855 GO:0003968
Tsu01g01141 1132 Pfam RNA dependent RNA polymerase 364 928 IPR007855 GO:0003968
Tsu01g01141 1132 PANTHER RNA-DEPENDENT RNA POLYMERASE 2 1116 - -
Tsu01g01141 1132 CDD RRM_SF 5 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01141 Tsu-Chr1 10545623 10554688 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01141 01 10545623 10554688 Tsu01g01141 01 10545623 10554688 ECH