Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01137 ATGGCGACTATGACGAGTTTGATCGGTCTCATCAACAAGATCCAACGTGCATGCACTGTCTTAGGTGATCACGGTGGCGAGGGTTTGTCACTCTGGGAAGCTCTTCCCTCTGTCGCCGTCGTTGGAGGACAGAGTTCAGGGAAATCGTCGGTGTTGGAGAGTGTTGTTGGAAGGGATTTTCTGCCACGTGGATCTGGTATTGTCACACGGAGGCCGTTAGTGTTGCAACTTCACAAGACAGATGATGGACAACAAGATTATGCCGAGTTTCTTCATGCACCCAGAAAGAGATACACTGATTTTGCTGCTGTAAGGAAGGAAATTTCAGATGAAACAGATCGTATAACTGGGAAGTCAAAGGCAATTTCAAACATTCCCATTCAACTCAGCATATATTCTCCAAATgTTGTGAACTTAACCCTCATAGATCTTCCTGGATTGACAAAGGTTGCAGTAGAGGGACAATCAGAAAGTATTGTTCAAGATATTGAAAACATGGTTCGATCCTATGTTGATAAGCCTAACTGCATTATATTGGCCATCTCTCCTGCAAACCAAGATATTGCCACTTCAGATGcaataaaaattgcaaaagaaGTTGATCCTTCAGGTGATAGAACATTTGGAGTGTTGACAAAACTTGATCTTATGGATAAAGGAACTAATGCCGTTGAGGTTCTGGAAGGAAAGCATTACAGGTTGCAGCATCCATGGGTTGGAATTGTGAACCGTTCACAAGCAGATATTAATAAAAACGTTGACATGATTGTTGCTCGCAAGAAGGAGCGTGAATATTTTGAGACGAGCCCTGAATATGGACATCTGGCACATAAAATGGGTGCAGAATATCTTGCCAAGCTTCTATCTGAGCATCTGGAGGTCGTCATTAGGCAGCGGATTCCTAGTATCATTGCCTTAATAAACAAAACCATTGACGAGCTTAATGCAGAGTTGGACCGTATTGGCCGGCCTATAGCTGTGGATTCAGGGGCCCAACTCTACACTATTTTAGAGATGTGTCGAGCATTTGACAAAGTATTTAAAGAACACATCGATGGAGGACGTCCAGGTGGGGACAAAATTTATGGCGTTTTTGACAATCAATTACCGGCTGCTTTGAAAAAGCTCCCCTTTGATCGTCATCTTTCCATAAAAAACGTACAGCGAGTCGTTACAGAAGCCGATGGTTATCAGCCCCATCTGATTGCTCCAGAACAAGGGTACAGAAGACTTATTGAAGGATGTTTAGGTTATTTCAAAGGCCCAGCTGATGCCTCTGTGGATGCTGTCCACCTTGTTTTAAAGGAACTTGTGCGAAAAGCAATTGCAGCAACTGAGGAATTGAAGAGGTTTCCAACTCTTAAAAATGAAATAGCTACAGCTGCAAATGATTCTTTGGAAAGATTCCGAGAAGAAAGTAGGAAGACAGTGACCCGGCTAGTTGATATGGAGTCTAGCTATCTAACAGTAGAGTTTTTTCGGAAGATTCACCTTGAACCAGAAGCGAACCAGAAAGAAAGTCGGAATACTCCTAATCCCAATCTGGACAATTTCTCAGATAATCACCTCAGGAAAATTGGATCAAATGTTAATGCCTATATCAACATGGTTTGTGACACACTTAAAAATTCTATACCAAAGGCCGTGGTTTATTGTCAAGTTAGAGAGGCGAAGAGATCATTGCTCAATCGCTTTTATGTTCAAGTTGGGAGAAAAGAGAAGGAACAACTTGGGGCCATGTTGGATGAAGATCCCGCACTTATGGAAAAGAGAACACAATTAGCTAAAAGGCTTGAATTGTACAAGCAAGCTAGGGATGACATTGATTCAGTGGCTTGGAAATAA 1845 0.4195 MATMTSLIGLINKIQRACTVLGDHGGEGLSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTDDGQQDYAEFLHAPRKRYTDFAAVRKEISDETDRITGKSKAISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQSESIVQDIENMVRSYVDKPNCIILAISPANQDIATSDAIKIAKEVDPSGDRTFGVLTKLDLMDKGTNAVEVLEGKHYRLQHPWVGIVNRSQADINKNVDMIVARKKEREYFETSPEYGHLAHKMGAEYLAKLLSEHLEVVIRQRIPSIIALINKTIDELNAELDRIGRPIAVDSGAQLYTILEMCRAFDKVFKEHIDGGRPGGDKIYGVFDNQLPAALKKLPFDRHLSIKNVQRVVTEADGYQPHLIAPEQGYRRLIEGCLGYFKGPADASVDAVHLVLKELVRKAIAATEELKRFPTLKNEIATAANDSLERFREESRKTVTRLVDMESSYLTVEFFRKIHLEPEANQKESRNTPNPNLDNFSDNHLRKIGSNVNAYINMVCDTLKNSIPKAVVYCQVREAKRSLLNRFYVQVGRKEKEQLGAMLDEDPALMEKRTQLAKRLELYKQARDDIDSVAWK 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01137 614 Gene3D Dynamin, middle domain 334 591 - -
Tsu01g01137 614 Pfam Dynamin central region 222 489 IPR000375 -
Tsu01g01137 614 Pfam Dynamin GTPase effector domain 521 611 IPR003130 GO:0003924|GO:0005525
Tsu01g01137 614 PRINTS Dynamin signature 35 53 IPR022812 -
Tsu01g01137 614 PRINTS Dynamin signature 60 77 IPR022812 -
Tsu01g01137 614 PRINTS Dynamin signature 133 150 IPR022812 -
Tsu01g01137 614 PRINTS Dynamin signature 183 201 IPR022812 -
Tsu01g01137 614 PRINTS Dynamin signature 202 218 IPR022812 -
Tsu01g01137 614 PRINTS Dynamin signature 225 244 IPR022812 -
Tsu01g01137 614 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 301 IPR030381 GO:0005525
Tsu01g01137 614 PANTHER DYNAMIN 4 614 IPR022812 -
Tsu01g01137 614 SMART GED_2 518 611 IPR003130 GO:0003924|GO:0005525
Tsu01g01137 614 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 309 IPR027417 -
Tsu01g01137 614 SMART dynamin_3 4 252 IPR001401 GO:0003924|GO:0005525
Tsu01g01137 614 Gene3D - 4 310 IPR027417 -
Tsu01g01137 614 PANTHER BNAA09G45430D PROTEIN 4 614 - -
Tsu01g01137 614 CDD DLP_1 35 301 IPR001401 GO:0003924|GO:0005525
Tsu01g01137 614 Pfam Dynamin family 38 213 IPR045063 -
Tsu01g01137 614 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
Tsu01g01137 614 ProSiteProfiles GED domain profile. 523 614 IPR020850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01137 Tsu-Chr1 10487586 10494583 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01137 01 10487586 10494583 Tsu01g01137 01 10487586 10494583 ECH