Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01130 ATGGCGGAAGCTCTCTCTGTGATGCCGGCCGCCGTGCTACGTAACCTTGCTGATAAGCTTTATGAGAAACGCAAAAATGCTGCTCTTgagGTTGAAGGGATTGTTAAACAGCTTGCTTCTGCTGGAGATCATGATAAGGTAACTGCTGTGATCAAATTGTTGACTAACGAATTCACGTTATCGCCGCAAGCAAATCATCGCAAGGGAGGGTTGATAAGCTTAGCTGCTGCTACTGTTGGACTGACTAATGAAGCTACTCAGCATCTTGATAAAATTGTGCCTCCAGTGTTAAATTCTTTCTCGGATCAAGATAGTAGAGTTCGTTATTATGCATGTGAAGCACTATATAACATTGCTAAGGTTGTGAGAGGAGATTTTATTGTATACTTCAACGATATCTTTGATGCCTTATGCAAGCTTAGTGCAGATTCAGATGGCAATGTACAAAGTGCTGCACATCTCTTAGATCGACTCGTGAAGGATATTGTGACCGAAAGTGATCAGTTCAGGTGCACTCTCTTCTCACTATTTAGCTATATGCTTCTCTGTATGACTATCTTGTGTTTCAAAGAGACTTGTACTCATGTAGATATGTGGATCTCTCTATGTAACTTACACTGCTTCATACCCCTCCGCTTTCATTTCTTGATATTCAGTATTGAAGAATTTATACCATTATTGAGGGAGCGCATGAATGTACTGAATCCATATGTCCGCCAGTTTTTGGTAGGATGGATTACTGTATTGGACAGTGTCCCAGATATTGATATGCTGGGTTTTCTTCCTGATTTTCTTGATGGTTTGTTTAACATGTTGAGCGATTCAAGTCATGAAATACGTCAACAAGCTGATTCAGCTCTTTCTGAGTTTCTCCACGAGATAAAAAACTCCCCATCTGTAGATTATGGTCGAATGGCTCAAATACTGGTACAGCGGGCTGGTTCTCCAGATGAATTTACTAGGTTAACAGCTATCACATGGATAAATGAGTTTGTCAAACTTGGTGGAGACCAGCTTGTTCCATACTACGCTGCCATTCTTGGAGCTATTTTGCCTTGCATATCCGATAAAGAAGACAAAATTAGAGTGGTTGCTAGGGAAACCAATGAAGAATTACAAGCAATCAATGCTGGTGATCCAGCTGAAGCGTTTGATGTAGGAGCAATTCTGTCCATTGCAAGGAGGCAACTATCTAGTGAATGGGAGGCTACTCGAATCGAAGCTTTGCACTGGATATCAATCCTTTTAAACAGACATCGTATTGAGGTTTTGACATACCTGAATGATATATTTGACACCCTACTGAAAGCACTTTCAGATCCATCTGATGAGGTTGTTCTTTTAGTTCTTGATGTTCATGCATGCATTGCAAGAGATCCTCTGCACTTCCGTCATCTTGTCGTTTTCCTTGTGCACAGTTTCAAGCTAGATAATTCTCTTTTGGAGAAGCGTGGTGCTTTGATAATTCGTCGCCTATGTGTGCTTTTGAATGCTGAGAGAGTCTACCGTGAACTTTCTACAATATTAGAAGGAGAATCAGATTTGGATTTTGCATCAATTATGGTTCAGgcTTTGAATTTGATCTTACTTACATCATCAGAATTGTCTGAGATTCGAGATCTTTTGAAGCAGTCACTGGTAAATCCTGCCGGGAAGGACTTGTATGTTTCTTTATATGCCTCTTGGTGTCATTCTCCAATGGCAATTATAAGTCTCTGCTTTTTAGCTCAGACTTACCGACATGCAAGTGCTGTGATTCAATCTCTGGCAGAGGAGGATATAAATGTCAAGTTTTTGGTCCAATTGGATAAATTGATTCGCTTGCTGGAAACTCCAATCTTTGCTTATCTTAGATTGCAGCTTCTCGATCCTGGAAGATATTTATGGCTATTCAAAGCATTGTATGGTCTTTTGATGTTGCTTCCTCAGCAAAGTGGAGCCTTTAAGATACTAAAAACTCGTTTAAAAGCTGTGCCGTCATATTCTTTCAATCGCGAGCAACTGAATAGAATGCCTTCTGGGGATTACTACCAATTTGTTCCTCAGATGCCTGACGGCAATCAAACAGAAGAGGATGGTGGGAGCTTATATAATGGATTAAACTTTGCTGCAAGGTTACAACAGTTTCAGCAAATGCAGCAGCAACATAGGGTACACACTAAATCGCGAAGAGCATCACGCAGTTTATCCACTTCATTACCAAAGGAGGCACAAAAAGAGGAAGAACCACATAGACCTCAGTCTACTGATCTTAATGTTCCTCCTTCAAGACCAAGGAGAAATTCAGGGCAACTACAACTATAA 2304 0.4045 MAEALSVMPAAVLRNLADKLYEKRKNAALEVEGIVKQLASAGDHDKVTAVIKLLTNEFTLSPQANHRKGGLISLAAATVGLTNEATQHLDKIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIVYFNDIFDALCKLSADSDGNVQSAAHLLDRLVKDIVTESDQFRCTLFSLFSYMLLCMTILCFKETCTHVDMWISLCNLHCFIPLRFHFLIFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLHEIKNSPSVDYGRMAQILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYAAILGAILPCISDKEDKIRVVARETNEELQAINAGDPAEAFDVGAILSIARRQLSSEWEATRIEALHWISILLNRHRIEVLTYLNDIFDTLLKALSDPSDEVVLLVLDVHACIARDPLHFRHLVVFLVHSFKLDNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMVQALNLILLTSSELSEIRDLLKQSLVNPAGKDLYVSLYASWCHSPMAIISLCFLAQTYRHASAVIQSLAEEDINVKFLVQLDKLIRLLETPIFAYLRLQLLDPGRYLWLFKALYGLLMLLPQQSGAFKILKTRLKAVPSYSFNREQLNRMPSGDYYQFVPQMPDGNQTEEDGGSLYNGLNFAARLQQFQQMQQQHRVHTKSRRASRSLSTSLPKEAQKEEEPHRPQSTDLNVPPSRPRRNSGQLQL 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01130 767 SUPERFAMILY ARM repeat 11 592 IPR016024 -
Tsu01g01130 767 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Tsu01g01130 767 PANTHER PROTEIN VAC14 HOMOLOG 218 737 - -
Tsu01g01130 767 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Tsu01g01130 767 Pfam Vacuolar protein 14 C-terminal Fig4p binding 479 658 IPR021841 -
Tsu01g01130 767 MobiDBLite consensus disorder prediction 749 767 - -
Tsu01g01130 767 PANTHER TAX1 BINDING PROTEIN-RELATED 218 737 IPR026825 GO:0006661|GO:0070772
Tsu01g01130 767 PANTHER PROTEIN VAC14 HOMOLOG 4 172 - -
Tsu01g01130 767 Gene3D - 2 187 IPR011989 -
Tsu01g01130 767 PANTHER TAX1 BINDING PROTEIN-RELATED 4 172 IPR026825 GO:0006661|GO:0070772
Tsu01g01130 767 MobiDBLite consensus disorder prediction 711 767 - -
Tsu01g01130 767 Gene3D - 205 290 IPR011989 -
Tsu01g01130 767 Gene3D - 291 459 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01130 Tsu-Chr1 10403111 10414104 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01130 01 10403111 10414104 Tsu01g01130 01 10403111 10414104 ECH