Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01124 ATGGTTTGTTTGGTATCTCGTTCTGGAAGGCAGATGCAAAGATACAATAGTGCCGGTGGCCGTCAAGTTGTCGGGTGTATCCCATACAGATATAAACAAGACATTGATGGCAATATGAGTAATGAATTGGAGGTACTTGTTGTTAGTTCACAAAAGGGTCAAGCATTGATGTTTCCCAAGGGTGGATGGGAACTTGATGAATCTTTAGAAGAAGCAGCTTGTAGAGAATCTCTTGAAGAAGCAGGAGTTATAGGAATTGTTGAGCATGAATTGGGTGAATGGAGTTTTATTAGCAAAAGATATGGTACATACTATGAAGGTCACATGTTTCCCTTACTTGTCAAGGAACAACTTGATATTTGGGCTGAGAAAAATCTACGTACAAGAATATGGATGAATGTTGTTGAAGCTAGAGAAGTTTGCCAACATTGGTGGATGAAGGAAGCATTAGATATACTTGTTGATAGGCTAACTCCACagcaaaaaaaagaacatttagcatga 504 0.373 MVCLVSRSGRQMQRYNSAGGRQVVGCIPYRYKQDIDGNMSNELEVLVVSSQKGQALMFPKGGWELDESLEEAACRESLEEAGVIGIVEHELGEWSFISKRYGTYYEGHMFPLLVKEQLDIWAEKNLRTRIWMNVVEAREVCQHWWMKEALDILVDRLTPQQKKEHLA 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01124 167 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 1 163 - -
Tsu01g01124 167 Pfam NUDIX domain 44 138 IPR000086 -
Tsu01g01124 167 ProSitePatterns Nudix box signature. 61 82 IPR020084 GO:0016787
Tsu01g01124 167 CDD Nudix_Hydrolase_9 22 147 - -
Tsu01g01124 167 SUPERFAMILY Nudix 18 156 IPR015797 -
Tsu01g01124 167 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 156 - -
Tsu01g01124 167 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 1 163 - -
Tsu01g01124 167 ProSiteProfiles Nudix hydrolase domain profile. 19 154 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01124 Tsu-Chr1 10352772 10354300 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01124 01 10352772 10354300 Tsu01g01124 01 10352772 10354300 ECH