Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01122 ATGTCAATGTCATCACCAATCGCCACTCCTTCTCAACCACCACCAACCACCACATCTCCCCCTTACGACCGTCTCAAAGCTGTAAAACAATTCGACGAAACAAAAGCCGGTGTAAAAGGCTTAATCGATTCCGGTATCAAAACAATCCCTTCTATCTTCATTCATCCACCGGAAACCTTATCCGATCTTGCTCCAGGATCCGGACCTGAACCGGAGATTCCAATAATTGACCTCTCTGTTGTTCACTCCTCCCACGCCACCGTCGTTGATCAGATTCGTAATGCGGCGAGTACTGTTGGATTCTTTCAAGTGATTAACCATGGTATATCGCTAGAATTGATGCGAAGTGTTATTGGTGCTATGAAAGCGTTTCATGAACAGCCTGCGGACGTTAGAGCGCAGGTGTACCGTAGGGAGACGGGGACTGGTGTATCTTATATATCTAACGTTGATCTTTTCACTTCTAAAGCTGCCAGCTGGCGTGACACACTTCAGCTTAAGATGGGACCGGTTGCAGCGGATGAGAAGGAGATACCGGAGGTGTGCAGGAAGGAGGTGATGGAGTGGGATAGAGAAGTGGTTCGTGTGGGAGATATTTTGTTGGGTTTGTTGAGTGAAGGGTTGGGATTAGGCGCAGAAAGGCTTGCGGAGTTGGGTTTGTCGCAAGGGAGGGTGATGGTTGGCCACTATTACCCGTTTTGCCCTCAGCCTAATCTTACTGTTGGACTCAATTCCCATGCAGATCCAGGGGCATTGACAGTATTGTTGCAGGATCATATTGGTGGCTTACAGGTTAGGTCCAAACAGGGTTGGATTAATGTCAAGCCTGTTGATGGAGCTTTGGTTATCAACATTGGAGATTTACTTCagATGGTTTCTAATGAGGATTATAAGAGTGCTGATCATCGAGTATTAGCCAATCCTTCTAACGAGCCACGAGTCTCGATTGCCGTTTTCCTCAACCCGGGTGACAGAGAGAAGCTCTTCGGACCTTTACCAGAGCTAACATCAGAACAGAAACCAGCTCTTTATAGAGATTTCACACTCAACGAATTTATGACAAGGTACTTCAAGAAAGAGTTTAATGCTAAATCATTGACAGATTTCTTCAGAAAATGA 1119 0.4593 MSMSSPIATPSQPPPTTTSPPYDRLKAVKQFDETKAGVKGLIDSGIKTIPSIFIHPPETLSDLAPGSGPEPEIPIIDLSVVHSSHATVVDQIRNAASTVGFFQVINHGISLELMRSVIGAMKAFHEQPADVRAQVYRRETGTGVSYISNVDLFTSKAASWRDTLQLKMGPVAADEKEIPEVCRKEVMEWDREVVRVGDILLGLLSEGLGLGAERLAELGLSQGRVMVGHYYPFCPQPNLTVGLNSHADPGALTVLLQDHIGGLQVRSKQGWINVKPVDGALVINIGDLLQMVSNEDYKSADHRVLANPSNEPRVSIAVFLNPGDREKLFGPLPELTSEQKPALYRDFTLNEFMTRYFKKEFNAKSLTDFFRK 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01122 372 Pfam 2OG-Fe(II) oxygenase superfamily 225 322 IPR044861 -
Tsu01g01122 372 Pfam non-haem dioxygenase in morphine synthesis N-terminal 73 169 IPR026992 -
Tsu01g01122 372 Gene3D - 28 354 IPR027443 -
Tsu01g01122 372 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 222 322 IPR005123 -
Tsu01g01122 372 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 18 362 - -
Tsu01g01122 372 MobiDBLite consensus disorder prediction 1 23 - -
Tsu01g01122 372 SUPERFAMILY Clavaminate synthase-like 35 362 - -
Tsu01g01122 372 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE HOMOLOG 4-LIKE 18 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01122 Tsu-Chr1 10341039 10344383 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01122 22 371 Glycosyltransferase AT5G59530 42.458 4.42e-97 291
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01122 01 10341039 10344383 Tsu01g01122 01 10341039 10344383 ECH