Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05904 ATGGAAGAAGATGCAGTGGCAAAGAATGAGGAAGAGGAATTCAACACAGGACCACTATCTGTACTCATGATGAGTGTGAAAAACAACACACAGGTACTGATAAATTGTCGCAACAACAAAAAGCTTCTAGGCCGTGTCAGGGCTTTTGATAGGCACTGCAACATGGTTCTTGAAAATGTCAGGGAAATGTGGACTGAGGTGCCTAAGACTGGTAAAGGAAAGAAAAAGGCCCAGCCAGTCAACAAGGACAGATTTATCAGCAAAATGTTCCTCCGTGGTGATTCAGTCATCATTGTTCTTAGGAACCCCAAATAA 315 0.4286 MEEDAVAKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05904 104 SMART Sm3 22 101 IPR001163 -
Trre7g05904 104 SUPERFAMILY Sm-like ribonucleoproteins 17 102 IPR010920 -
Trre7g05904 104 CDD Sm_D2 14 103 IPR027248 GO:0008380|GO:0030532
Trre7g05904 104 Gene3D - 12 104 - -
Trre7g05904 104 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 3 104 IPR027248 GO:0008380|GO:0030532
Trre7g05904 104 FunFam Small nuclear ribonucleoprotein Sm D2 12 104 - -
Trre7g05904 104 Pfam LSM domain 25 99 IPR001163 -
Trre7g05904 104 ProSiteProfiles Sm domain profile. 19 104 IPR047575 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05904 Trre-Chr7 63617233 63618093 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05904 7 63617233 63618093 Trre7g05904 7 63617233 63618093 ECH