Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05890 ATGGGTGAAACCATTGTTGAGAAAGCTCTAAAAAGCTTAGGAAAAGGCTTTGATTTAACATCAGATTTCAGGCTAAAATTCTGCAAAGGTGAAGAACGTTTGGTTCTTCTTAATGAAGTAGAGAAAAGAGAATTAGCAGTGCCGGGTTTTGGATCCATAAGAGATGTTTCTGTTGATATCAAATGTGATAAAGGAGATCGCACACGCTATCAATCTGATATCCTCACCTTCACTCAAATGTCAGAGTTATTCAATAGGAAGAGTTCAATTCCTGGGAAAATTCCAAGTGGTTACTTCAATACAGTGTTTGGGTTTGATGATGGTTCATGGGCAGCTGAAGCAGCTAATACAAAGTGTTTGGGTCTTGATGGATATTTGATAAGACTATTTAATCTTCATATTGATAGATTACCACTTATTCTCTCTAAACAAGTTCTTGAAGCTGTTCCTACTTCATGGGATCCTTCTGCACTTGCAAGATTCATTGAGAACTTTGGGACTCACATCCTTGTGGGGCTTAGCATTGGTGGCAAAGATTTATTGCTAGTCAAACAAGATGTGTCTTCCAACTTGGGGCCATCAGAGCTCAAAAATCACTTGGATGAGCTTGGAGAACAGTTATTTAGTGGGACATGCAATTTCCTTCCCAAAAATAAAGATCAGAAACACAAGGTACCACCTGCTTTTGATGTCTTTGGTCCGCAAACCATTGCATTCAACGGCTCTGCATCCGTTTGCGCAAAAGATGGAATAACAGTGATATGTGCAAAGAGGGGTGGGGATACACAAGTGAGCAGCCACAGTGAATGGCTTCAAACAGTTCCTAACAAACCAGATGCAATGGATTTTACCTTCATTCCCATCACTTCTCTTCTTAAAGGTGCTCCTGGTAGGGGCTTCCTATCCCATGCTATCAACCTCTATCTTCGATATAAGCCTCCAATGTCAGATTTGCCATACTTTCTTGACTACCAAGCCCACAAGCTTTGGGCTCCTGTTCACAATGATCTTCCTCTTGGTCCAAGTACAAACATAACTACTCTTTCACCTTTTCTCACCCTCAACTTGATGGGTCCCAAACTTTATGTAAATACTGATAAGGTCACAGTTGGCCAAAGGCCAATCACAGGGATGCGCTTGTTTCTTGAAGGCATGAAATGCAACAGATTAGCCATACATGTGGAACATCTAATAAACACTCCAACAATGCTTAGCAACAAAATTGAAGACACAACAATATGGTCAGAAGAAATGAGTGATGATCGTTACTTTGATGCAATAAATGGGAAGAAATTTTCCCATGTATGTTCAGCACCAGTGAAATACAATCCAAAATGGAGCTCAGACAATAATGTGGCATTTATTGTGACAGGAGCACAACTTCATGTGAAGAAACATGACAACAAAAGTGTTCTTCATCTAAGATTGTTGTTCTCCAAGGTGTCTAATTGTTTTGTTGTTAAATCAAGTTGGACACAGGGCACTTCTAGGTTGTCCCAAAAATCTGGAATTTTCTCAGCAATAAGCACATCAATTTCTAGTTCAAGTTCAAGTTCTAGTTCTAGTTCTAGCAAAGACAAAAAGAAATCAACAGTAGTTATGGATTCAAGTGTGTTTCCAACAGGACCTCCAGTGCCTGTACAAACACAAAAAATGTTGAAATTTGTGGACACATCACAGTTATGTAAAGGGCCACAAGACACACCTGGTCATTGGTTGGTAACTGGGGCAAAATTGGTCATGGACAAAGGTAGGATATGTTTATGGGCCAAGTTCTCTTTGTTAAATACTAGCTTATGA 1800 0.3967 MGETIVEKALKSLGKGFDLTSDFRLKFCKGEERLVLLNEVEKRELAVPGFGSIRDVSVDIKCDKGDRTRYQSDILTFTQMSELFNRKSSIPGKIPSGYFNTVFGFDDGSWAAEAANTKCLGLDGYLIRLFNLHIDRLPLILSKQVLEAVPTSWDPSALARFIENFGTHILVGLSIGGKDLLLVKQDVSSNLGPSELKNHLDELGEQLFSGTCNFLPKNKDQKHKVPPAFDVFGPQTIAFNGSASVCAKDGITVICAKRGGDTQVSSHSEWLQTVPNKPDAMDFTFIPITSLLKGAPGRGFLSHAINLYLRYKPPMSDLPYFLDYQAHKLWAPVHNDLPLGPSTNITTLSPFLTLNLMGPKLYVNTDKVTVGQRPITGMRLFLEGMKCNRLAIHVEHLINTPTMLSNKIEDTTIWSEEMSDDRYFDAINGKKFSHVCSAPVKYNPKWSSDNNVAFIVTGAQLHVKKHDNKSVLHLRLLFSKVSNCFVVKSSWTQGTSRLSQKSGIFSAISTSISSSSSSSSSSSSKDKKKSTVVMDSSVFPTGPPVPVQTQKMLKFVDTSQLCKGPQDTPGHWLVTGAKLVMDKGRICLWAKFSLLNTSL 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05890 599 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 4 596 IPR044663 GO:0006952|GO:0012501|GO:2000031
Trre7g05890 599 SMART MACPF_8 117 310 IPR020864 -
Trre7g05890 599 Pfam MAC/Perforin domain 99 308 IPR020864 -
Trre7g05890 599 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 322 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05890 Trre-Chr7 63534982 63543054 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05890 7 63534982 63543054 Trre7g05890 7 63534982 63543054 ECH