Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05875 ATGGCCGACGCTCTGTCGTCTATTCCGGCAGCCGTTCTTCGCAACCTTGCTGATAAGCTCTATGAGAAACGCAAAAATGCTGCTCTTGAGATTGAGAATATAGTGAAGCAATTAGCTGCTAATGGAGATCATGATAAAATTGTGGCTCTTATCAATTTATTGACTACTGAATTTACTAATTCACCACAAGCTAATCATCGGAAGGGAGGATTGATTGGATTAGCTGCTGCAACTGTTGGGTTGACTTCTGAAGCAGCTCAGTATCTTGAGAAAATTGTTCCCCCTGTGCTAAATTCTTTCTCTGATCAAGAAAGCAGAGTTCGTTATTATGCTTGCGAAGCACTATATAACATAGCTAAGGTTGTGAGAGGGGATTTTATTGTATTCTTCAACCAGATTTTTGATGCCTTGTGCAAGCTTTCTTGCGACTCTGATGGAAATGTACAAAGTGCTGCTCACCTATTGGATCGGCTTGTGAAGGATATTGTGACTGAAAGTGATCAGTTCAGTATTGAAGAATTTATACCACTGTTGAGGGAGCGCATGAATGTATTGAATCCATATGTCCGCCAGTTTTTGGTAGGATGGATTACTGTATTGGACAGTGTCCCAGATATTGATATGCTGGGTTTCCTTCCTGATTTTCTTGATGGATTGTTTAACATGTTAAGTGATTCGAGTCATGAAATACGTCAACAGGCTGATTCAGCTCTTTCAGAGTTTCTTCAAGAAATTAAGAACTCACCATCTGTAGATTATGGTCGAATGGCTGAAATACTGGTACAGAGGGCAGGTTCTGGAGATGAATTTACGAGGCTAACAGCTATCACATGGATAAATGAGTTTGTCAAACTTGGTGGAGACCAGCTTGTTCCATATTATGCAGACATTCTTGGAGCCATTTTGCCCTGTATATCAGATAAAGAAGAGAAAATCAGAGTTGTTGCTCGCGAAACGAATGAGGAGCTACGTTCCATCAAGGCTGATCCATCTGAAGCATTTAAAGTAGAAGCAATCCTCTCCATTGCTAGGAGGCAATTATCTAGTGAATGGGAGGCTACTCGAATTGAAGCTTTGCACTGGATATCAACCCTTATAAATGAATATCGCACTGAGGTTTTGCAATACCTTAGCGACATATTCGATACCCTGCTCAAGGCACTTTCAGATCCATCTGATGAGGTTGTTCTTCTAGTTCTTGAAGTTCATGCGTGCATTGCGAAAGACCCTCAGCACTTTCGCCAGCTTGTTGTTTTCCTGATGCACAATTTCCGGATAGACAATTCACTTTTGGAGAAGCGTGGTGCTTTAATAATCCGCCGGCTCTGTGTGCTTTTGGATGCTGAGAGAGTCTACCGTGAACTTTCTACAATACTAGAAGGGGAATCTAATTTGGATTTTGCATCAATAATGGTTCAGGCTTTGAATTTGATCTTACTTACATCATCAGAACTATCTGAGATTAGAGTTCTTTTGAAGCAATCATTGGTAAATCCTGCCGGGAAGGATTTATTTGTTTCTTTGTATGCCTCATGGTGTCATTCTCCAATGGCGATTATCAGTCTTTGCTTCTTAGCTCAGACTTACCAACATGCGAGTACTGTGATTCAATCTCTGGTAGAGGAGGATATTAATGTGAAGTTTTTAGTACAACTGGATAAATTGATTCGTTTGCTGGAAACTCCGGTCTTTGCTTATCTAAGATTGCAGCTTCTGGAGCCTGGAAGATATACATGGTTATTTAAAGCACTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCTGCCTTCAAGATACTAAAAACTCGTTTGAAAGCCGTGCCATCGTATTCTTTCAACGGTGAACAATTGAAGAAAACATCCTCCGGGAACCCCTATCAATTTCTCCAACACATGTCTGGTGGATCTCACACAGCAGAGGATGGCGACGTAGCCGCGGACAGTGGGAACTCACACAATGGAATAAATTTTGTTGCAAGGCTAAATCAGTTTCAGCAAATGCAGAAACAGCATCGCGAACATTTTAGAGCACAGGCACAGATACGCAAAAATTCCACCTCAGTATTAAAGGAGGAGGAGGTACAAAGACAAGAAGAAGAAACAAAGAGATCTCATTTGAATGAGCTTAATGCTCCACCAAGATCATTCAAGAGAGCTAGCTAA 2166 0.4118 MADALSSIPAAVLRNLADKLYEKRKNAALEIENIVKQLAANGDHDKIVALINLLTTEFTNSPQANHRKGGLIGLAAATVGLTSEAAQYLEKIVPPVLNSFSDQESRVRYYACEALYNIAKVVRGDFIVFFNQIFDALCKLSCDSDGNVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSGDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVARETNEELRSIKADPSEAFKVEAILSIARRQLSSEWEATRIEALHWISTLINEYRTEVLQYLSDIFDTLLKALSDPSDEVVLLVLEVHACIAKDPQHFRQLVVFLMHNFRIDNSLLEKRGALIIRRLCVLLDAERVYRELSTILEGESNLDFASIMVQALNLILLTSSELSEIRVLLKQSLVNPAGKDLFVSLYASWCHSPMAIISLCFLAQTYQHASTVIQSLVEEDINVKFLVQLDKLIRLLETPVFAYLRLQLLEPGRYTWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNGEQLKKTSSGNPYQFLQHMSGGSHTAEDGDVAADSGNSHNGINFVARLNQFQQMQKQHREHFRAQAQIRKNSTSVLKEEEVQRQEEETKRSHLNELNAPPRSFKRAS 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05875 721 FunFam protein VAC14 homolog 126 248 - -
Trre7g05875 721 Coils Coil 17 37 - -
Trre7g05875 721 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Trre7g05875 721 Gene3D - 250 416 IPR011989 -
Trre7g05875 721 Gene3D - 1 249 IPR011989 -
Trre7g05875 721 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Trre7g05875 721 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Trre7g05875 721 MobiDBLite consensus disorder prediction 681 721 - -
Trre7g05875 721 PANTHER TAX1 BINDING PROTEIN-RELATED 7 686 IPR026825 GO:0006661|GO:0070772
Trre7g05875 721 FunFam protein VAC14 homolog isoform X1 249 410 - -
Trre7g05875 721 Coils Coil 690 710 - -
Trre7g05875 721 MobiDBLite consensus disorder prediction 687 708 - -
Trre7g05875 721 FunFam ARM repeat superfamily protein 5 125 - -
Trre7g05875 721 SUPERFAMILY ARM repeat 3 545 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05875 Trre-Chr7 63422452 63430907 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05875 7 63422452 63430907 Trre7g05875 7 63422452 63430907 ECH