Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre7g05863 | ATGGTGGTTTGTTTGGCATCTAGAACTGGAAGGGATTTGCAGAGATACAACAACATGGGTGGCCGACAAGTTGTAGGATGCATACCTTATAGATATAAAGAAGACACTGATGGTAATATGAGCAATGAATTGGAAGTACTAGTAGTTAGTTCACAAAAAAATCAAAGACTAATGTTTCCTAAGGGAGGATGGGAACTAGATGAATCTTTAGAAGAAGCAGCTTCAAGGGAGTCCCTTGAAGAAGCAGGAGTCATAGGAAATGTTGAGTATGAATTGGGGCAGTGGAATTTCATTAGCAAAAGATATGGCATATACTATGAAGGGTACATGTTCCCCTTATTTGTGAAGGAACAACTTGATCAATGGCCTGAGAAAAATGTTAGGAGAAGAGTATGGATGACGGTTGCTCAAGCTAGAGAAGTTTGTCAGCATTGGTGGATGAAGGAAGCGTTAGATATATTGGTTCAAAGACTCATCATTTCTTCAGATTAA | 492 | 0.3902 | MVVCLASRTGRDLQRYNNMGGRQVVGCIPYRYKEDTDGNMSNELEVLVVSSQKNQRLMFPKGGWELDESLEEAASRESLEEAGVIGNVEYELGQWNFISKRYGIYYEGYMFPLFVKEQLDQWPEKNVRRRVWMTVAQAREVCQHWWMKEALDILVQRLIISSD | 163 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre7g05863 | 163 | Pfam | NUDIX domain | 45 | 143 | IPR000086 | - | |
| Trre7g05863 | 163 | Gene3D | Nucleoside Triphosphate Pyrophosphohydrolase | 7 | 157 | - | - | |
| Trre7g05863 | 163 | PANTHER | DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE | 7 | 158 | - | - | |
| Trre7g05863 | 163 | FunFam | Nudix hydrolase 17, mitochondrial | 6 | 157 | - | - | |
| Trre7g05863 | 163 | ProSiteProfiles | Nudix hydrolase domain profile. | 20 | 155 | IPR000086 | - | |
| Trre7g05863 | 163 | SUPERFAMILY | Nudix | 14 | 157 | IPR015797 | - | |
| Trre7g05863 | 163 | ProSitePatterns | Nudix box signature. | 62 | 83 | IPR020084 | GO:0016787 | |
| Trre7g05863 | 163 | CDD | Nudix_Hydrolase_9 | 23 | 148 | IPR047198 | GO:0016462 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trre7g05863 | Trre-Chr7 | 63383986 | 63385046 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Trre7g05863 | 7 | 63383986 | 63385046 | Trre7g05863 | 7 | 63383986 | 63385046 | ECH |