Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04360 ATGAGTTTCACCAACATACCGATCGTTCATAACAATATAGACCGTTTGCACCCACCAATTGTCATGGATGATGATGTGCTGAATATGCCGAATTGGGGTTACTATGAACCCTTCAAGGCGGGGAATCTCGGTCTGAACCTCATGCCGGGTATGAATGATCGTGAAACAAAACCATTTTTTCCTCCTGGTCGTGATCCAGCTATGTTAGTTGGTGCAAATGGAACTTTTCACCCTCGAGATAATGTTGCTGCTGTCGAGTCTCAGAATCCATTGAACTATGGAAGAGATAATTGGATGAACCAGAGACCTAGGTTTTATAACATGCAGGTCGCCAATCCAAATTATGCTGTTCCTCCTGAAACATCGCAAGGACCCTCCTTTCCGTTTATCCCATCTGCTGTTGCTGATCCACCAAGAAATGAGAATGTGGAAGAAATCGAAGAATTAGCTGTTAAGAAGGAAGGTGCCAAGTCGAAGAAAAGGAAATCTAAGGCTGCTGCTGTTACCACTCCAAAAGCTAAGAAACCCAGGAAGCAGAAGGATAATGGCAATGCTTCAGCTCAAGGTGTGAAACCACCGAAGAAGACTGTGGCACTTGAAATCAATGGAATTGAAATGGACATTTCTGGTCTACCTGTTCCAGTTTGTTCCTGCACTGGGAATCCTCAGCAATGTTATCGATGGGGCTGTGGAGGTTGGCAGTCTGCTTGTTGTACTACAAATGTGTCAATTTATCCTTTGCCGATGAGCATCAAAAGGCGTGGTGCAAGGATAGCTGGGAGGAAGATGAGCCAAGGGGCATTCAAAAAGGTTTTGGAAAAGCTTGCCGCTCAAGGTTACAATTTTGCTAACCCTATTGATCTGAAGACTCACTGGGCTAGACATGGCACCAACAAGTTTGTCACTATCAGATAA 915 0.4448 MSFTNIPIVHNNIDRLHPPIVMDDDVLNMPNWGYYEPFKAGNLGLNLMPGMNDRETKPFFPPGRDPAMLVGANGTFHPRDNVAAVESQNPLNYGRDNWMNQRPRFYNMQVANPNYAVPPETSQGPSFPFIPSAVADPPRNENVEEIEELAVKKEGAKSKKRKSKAAAVTTPKAKKPRKQKDNGNASAQGVKPPKKTVALEINGIEMDISGLPVPVCSCTGNPQQCYRWGCGGWQSACCTTNVSIYPLPMSIKRRGARIAGRKMSQGAFKKVLEKLAAQGYNFANPIDLKTHWARHGTNKFVTIR 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04360 304 PANTHER - 22 304 IPR010409 -
Trre7g04360 304 MobiDBLite consensus disorder prediction 150 193 - -
Trre7g04360 304 SMART GAGA_bind_2 22 304 IPR010409 -
Trre7g04360 304 MobiDBLite consensus disorder prediction 156 173 - -
Trre7g04360 304 Pfam GAGA binding protein-like family 22 304 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04360 Trre-Chr7 51491653 51493641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04360 22 304 BBR or BPC Transcription factor family AT2G01930 54.362 8.86e-99 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Trre7g04360 GAGA_bind 4.3e-96 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04360 7 51491653 51493641 Trre7g04360 7 51491653 51493641 ECH