Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01344 ATGGCTAGAGAGAGTGAACTTCCCATGGATTCAGATCCAATTGATCTTAACTCTTTCACTGAAGACATAAACAATCCCATGTTGACACATAATCCCAATCAAAACAATGTTGTTGCTACACCTAGTACCTTTCCATTCCAATTAGTCAACCTTAACTTCTCCAATAGAAACCAAACCTCTCATGAAACATTGAAAGAGATTGATTTCTTTAAGGTTAACAACATTGATCATAATAAGGGAAAAAAGATTGCCCTTTCCCTTGACAATGATCATATTGATACCAATTTATTGAAATTCAAACTCAACACTGGCACTGGTCTCAATCTTCTTACCCCCAATACTAGCAGTGATCAATCTATGGTGAATGATGATGGCATGTCCCCTACTTCTGAAGACAAGAGAATTAAGAATCAGATGGCTATTCTTCAAGGCGAGCTTGATCGAAAAAACATGGAGAATCATCGATTAAAGTTGATGCTAGGTCAACTTCAAGCAAATTACAATACCCTGCGTATGCATTTCAATAAAGTGATGCACGACCGTATGGTTGAGAGAAAGTCTAATGAGAAAAAGAAAATTGAGAATGGTGGAGTATTAGATCCAAGTAAAGTTATTGATCTTGAGTTGGCTCCTAATGTTGAGACTGAAATGGTTCTTGATCCCTCCTCTTCATCAATGGGAAGAAAAAGAAGTCGCGATGAATTAAGATCGCCGGCAAATAACACCAATGTTGCTTCCAATGAATTAGTCCTACAAAAGAACAAGAGTATTGTTAGTGATGGAAAGAAGGAACTTGGTAAAGGGATTGAAAAAGATGATAGTCCCATAGATAATGCTGAGAAAACTCAAATTTTGAGTCTTCCAAGCAATTTAACTGTTCTTGAAGCTGGTGATGGTCCATCCGGGAAAACAAGAGTTTCTGTTAGAACTCTATCACAAGTAGACATGATCCCAGATGGGGGCCAATGGAGAAAGTATGGTCAAAAACTGACTAAAGGAAACCCGCCGTGTCCTCGATCTTATTATCGATGCAGCTTATCTTCTAACTGCCCGGTTAGAAAACAGATACAAAGGTGTAATCAAGACACAAGAATCGTATGCACAACATATGAAGCATATCACAACCATCCTTTACCTCCAAAAGCCAAAGCAATGGCAGAAAGAACTTCATCAGCTGCAAAAATGATGCTCATAGGATCAACATCAAGCAATGATGGAAAAGGAGAAGCAAATTTGGTCACAAGAACATCTCTTCCAAGTTCTTCTTCAACATCGCCGATTCTTACACTCGACAATACTCAATCTTCAAATAATCGCCCGAGGCTTCAAAATCAGTTCAAAATTTATGTTAACAATCCTCAGAATTTTGCAAGCTCCTCAGCTTGTAAAGACTCTCAGAGGTTTACCAAAATGCCTCAAAACATATCAACAACATTTTCTGGACTTCATACGTCGTCGAAAAATGGTGCAAATTCTTCTCAATTGGTTGTGCCGGATATCGATCAGATGGTTAATGCTTCGATTGCATCTGATCCGAAGTTCACCAACGCTTTGGCGTCTGCAATTACTTTAATCATGCGTAGTTCTTCTCAGTCTACCAGCAGTGCTAGTACTAGTAGTGCTGCTGCTAATGGAACAGGAAGCAACGATAAGGGAAAGCAGCAGAATTAG 1671 0.389 MARESELPMDSDPIDLNSFTEDINNPMLTHNPNQNNVVATPSTFPFQLVNLNFSNRNQTSHETLKEIDFFKVNNIDHNKGKKIALSLDNDHIDTNLLKFKLNTGTGLNLLTPNTSSDQSMVNDDGMSPTSEDKRIKNQMAILQGELDRKNMENHRLKLMLGQLQANYNTLRMHFNKVMHDRMVERKSNEKKKIENGGVLDPSKVIDLELAPNVETEMVLDPSSSSMGRKRSRDELRSPANNTNVASNELVLQKNKSIVSDGKKELGKGIEKDDSPIDNAEKTQILSLPSNLTVLEAGDGPSGKTRVSVRTLSQVDMIPDGGQWRKYGQKLTKGNPPCPRSYYRCSLSSNCPVRKQIQRCNQDTRIVCTTYEAYHNHPLPPKAKAMAERTSSAAKMMLIGSTSSNDGKGEANLVTRTSLPSSSSTSPILTLDNTQSSNNRPRLQNQFKIYVNNPQNFASSSACKDSQRFTKMPQNISTTFSGLHTSSKNGANSSQLVVPDIDQMVNASIASDPKFTNALASAITLIMRSSSQSTSSASTSSAAANGTGSNDKGKQQN 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01344 556 MobiDBLite consensus disorder prediction 529 556 - -
Trre7g01344 556 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 109 536 IPR044810 GO:0003700
Trre7g01344 556 ProSiteProfiles WRKY domain profile. 312 379 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g01344 556 MobiDBLite consensus disorder prediction 111 131 - -
Trre7g01344 556 MobiDBLite consensus disorder prediction 218 243 - -
Trre7g01344 556 SUPERFAMILY WRKY DNA-binding domain 309 379 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre7g01344 556 MobiDBLite consensus disorder prediction 415 438 - -
Trre7g01344 556 SMART WRKY_cls 317 378 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g01344 556 Pfam WRKY DNA -binding domain 319 377 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g01344 556 Gene3D WRKY domain 302 380 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01344 Trre-Chr7 9775784 9778980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01344 62 526 WRKY Transcription Factor Family AT1G62300 33.871 2.44e-62 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre7g01344 WRKY 1.8e-20 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01344 7 9775784 9778980 Trre7g01344 7 9775784 9778980 ECH
Trre7g01344 7 9775784 9778980 Trre15g02323 15 19230073 19238431 ECH
Trre11g03899 11 52203281 52206969 Trre7g01344 7 9775784 9778980 PCT