Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03088 ATGGGTTCATTTCAGACACCAATTGGAATGAGAAGCTCCACATTGCTAGAAAGCTCATGCGGTTCCTTGTTACAGGAGCTGCAGGCAAGAAGCTTATTTATTTCGCAAATAATTTGGGATGAAATTGGAGAAGACAAGTTCCAGAGGGAAAAGGTTCTGCTGAATATGGAGCAAGAGTGCCTCGAGGTTTACAGAAAAAAAGTTGATAAAGCAAATACATCTAGAGCTAGTCTGCATCAGGAGTTGGCTGAAGCTGAGGCAGAATTTACTCACCTTCTTTTGTCCCTTGGCGAACGGTCTCTTCCTGAACGGCCAGATAAAAGGGCGGGTTCGCTAAAAGAGCAGCTAGATTCAATCACTCCGGCACTTCGGGAGATGCGCTTGAGGAAAGAAGAGAGATTAAACCAATTCCGAGCTGTGCAAGGGCAAATTCAAAGAATTTCTGCAGAAATTGCAGGTAACTCGGACGATGCACCCTCAACAATTGTAGTAAATGAGAATGATCTGTCACTAAAAAGACTCGAGGATTATCAGAATGAGCTGCAAAGGCTTTACAACGAGAAGAATGAAAGACTACAGCAAGTGGAGAAATACATGGACAAAATACACAGCTTGTCCACAATATTGGGAAAGGATTCCTCTGCAATCATCTTGCAAGTTCACCCCAGCTTGAATGATTTGTGTGGAATAACAAACAATATAAGTGACGCTATCCTACACAAACTCAATATCACGGTGGAGTCCCTTTATGAAGAAAAGCAAAATCGGCTAGACAAGCTTCACCATTTAGGCAAAGCACTATCAAATCTTTGGAATCTTATGGATACACCTTACCGTGATAGACAATCTTTTTCCCATGTTATCAATTTGTTGTCAGTCTCATCAGCAGAAGTATCGGATCCGGGAAGTCTTACACTAGAGATAGTCCAGCAGACTGAAGCTGAAGTCAAAAGACTAGATCAACAAAAGGCAAGCAAGATGAAGAAGCTATTCCAGAAGAAGCAGGAGGAACTAGAGTTGGTATGCAAAAAGTCACACGTTGAGATTCCTTCACGGACAGAAATGAACAATATAATTAGCCTCATAAACTCAGGGGAGATTGACCATTCCGATCTCCTCATGAGCATGGATGAACAGATATCAATAGCAAAAGAAGAGGCTTCCAGCAGGAAGGCTATAATGGAAAAGGTTGAGAAGTGGATGTTAGCACGTGATGAGGAGCGTTGGCTAGAAGAATACAGCATGGATGAGAAACGATACTCAGTCAGTAGAGGAGCTCATAAAAACTTGAGACGAGCAGAACGTGCCCGTATAATGGTCAGTAGAATGCCAGCTCTGGTAGATTTGCTAATAAAGATGACTAGGAGTTGGGAAGCAGAAAGAAATAAAGTTTTCTTGTATGATCAGGTTCCTCTAATGGAAATATTGGAAGAATATAACATACTAAGGCAAGAAAAGGAGGAGGATAAGAAAAGACAGCAGTCATGGGAAAAGAAGAAGGTCCAGAGCCAGATAGTTTTTGAGCGAGATAATATATATCCGTCAAGACCAGCCACCAGCAGTAGACGTGTTCCAAATAGAAGCTTAAACGGAAGTCAAGACTGTTCTGCGCCACTAAACAAAAGGATCTCAATAGGTATCCCACAAATGGGATCAAACAGCATATATTCAGGAAATCAAGGTATATCCTTCTTTAAGGATGGAAGGAAGATACAAAGGAAAAATATTTTTGGTGAACCTGCCTTTACTTCTCATATACGAGATGAGGCTTCTTCTACAGTGTCCATACATTCTGGACCATTTTCTCCATAA 1812 0.4139 MGSFQTPIGMRSSTLLESSCGSLLQELQARSLFISQIIWDEIGEDKFQREKVLLNMEQECLEVYRKKVDKANTSRASLHQELAEAEAEFTHLLLSLGERSLPERPDKRAGSLKEQLDSITPALREMRLRKEERLNQFRAVQGQIQRISAEIAGNSDDAPSTIVVNENDLSLKRLEDYQNELQRLYNEKNERLQQVEKYMDKIHSLSTILGKDSSAIILQVHPSLNDLCGITNNISDAILHKLNITVESLYEEKQNRLDKLHHLGKALSNLWNLMDTPYRDRQSFSHVINLLSVSSAEVSDPGSLTLEIVQQTEAEVKRLDQQKASKMKKLFQKKQEELELVCKKSHVEIPSRTEMNNIISLINSGEIDHSDLLMSMDEQISIAKEEASSRKAIMEKVEKWMLARDEERWLEEYSMDEKRYSVSRGAHKNLRRAERARIMVSRMPALVDLLIKMTRSWEAERNKVFLYDQVPLMEILEEYNILRQEKEEDKKRQQSWEKKKVQSQIVFERDNIYPSRPATSSRRVPNRSLNGSQDCSAPLNKRISIGIPQMGSNSIYSGNQGISFFKDGRKIQRKNIFGEPAFTSHIRDEASSTVSIHSGPFSP 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03088 603 Gene3D - 382 515 - -
Trre5g03088 603 Coils Coil 472 499 - -
Trre5g03088 603 Coils Coil 167 201 - -
Trre5g03088 603 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 16 554 IPR007145 GO:0000226|GO:0008017
Trre5g03088 603 Pfam Microtubule associated protein (MAP65/ASE1 family) 36 528 - -
Trre5g03088 603 MobiDBLite consensus disorder prediction 514 535 - -
Trre5g03088 603 Coils Coil 68 88 - -
Trre5g03088 603 Coils Coil 309 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03088 Trre-Chr5 26056140 26060133 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03088 12 563 EF-hand Containing Proteins AT5G62250 35.702 7.88e-88 281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03088 5 26056140 26060133 Trre5g03088 5 26056140 26060133 ECH