Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01286 ATGCCAATGGGAAATGCAGTTACACCGGAGATTAAGCATTTTCCGGCAGTGGTTACCGGTGGTGAGATACAGTACAGACCACCACCACAGCAACAGCAACAACCACAACAATGGTTTGTTGATGAGAGAGATGGGTTTATGAATTGGCTTCGTAGCGAATTCGCAGCTGCGAATGCGATTATTGATTGTCTTGTTCAGCATTTACGTGTTGTTGGTGAAGGTGGTGAGTATGATTTTGTTGTTGGTGCAATTGAGCAGAGGAGAGTTAATTGGAATCAGGTGCTACTTATGCAGCAGTATTTTTCGGTTTCTGAGGTGGCGTATGCGCTACAGCAAGTCGCGTGGAGGAGGCAACAGAAGAATGCGAAACCGGTTGTTAAGGAGTTTAGGAAGGTTAGACAATGGCAGAGGTTTGAGGGTGGTGGTAATGTTAAGGAAGGTAGTAATTCTAGTGTAGAATCTCGTCGCGGTGAAGTGAATTATGCGGTTAAAGGGTCTCAAGTAGTTGATAAGAGTGAAGATTATAAATCTAGTGGCAAAGTTGGAAGTAAGGATGATAAGATTTCAGACAGTGTTGAGGTGAAGAAAGATACTATAAGAAATCATCAATCTGATGGCATTTTGAAGACCTCTGTGAATTCTCAAGGATCTCTGTCCAGTGCAGAATGTAAAGCTGTGGGCGTAAATGCGGAATGTGCATCAAAGTCTGGAGAAAATGATTCACTTTCTATGCAAAATCAACATCAGAATGAGAATGGTTCTACCACAGGAAAAACTTTTATTAGCAATGAGATGCTTGATGGGAAGATGGTTAATGTGGTGGAAGGACTGAAGTTGTATGAGAATTTACTGGACAGTACTGAAGTTTCAAAACTTGTTTCATTGGTCAATGATTTGAGGGTTGCTGGAAGAAAAGGACAATTGCAAGGAAGCCAGACATATGTGGTTTCCAAAAGGCCCGTGAGAGGGCATGGAAGGGAGATGATTCAGTTGGGTGTTCCCGTTGCTGATGCACCACCAGACATGGACAATATGACAGCATCGTTCAAAGATAAGAATTTCGAATCTATTCCTTCCTTGTTTCAAGATATCGTTGAGCGCATGGCTGCCTCAAAAGTGATGACTGTGAAGCCTGATGCATGCATTGTGGATTTCTATAACGAGGGTGATCACTCAACGCCAAACAGTTGGCCATCTTGGTTTGGAAGGCCTATTTATACGCTTTTCCTGACTGAATGTGAGATGACTTTTGGTAGAACAATTGTCTCAGAACACCATGGGGATTTTAGGGGCAATGTCAAGCTTTCTCTTGTACCTGGGTCCCTTCTAGTGATGCAAGGGAAGTCAGCTGATTTTGCTAAACATGCTATTCCTTCTATTCACAAACAACGCATACTCGTTACTTTTACGAAGTCTTTACCAAAAAAGTCGTTGCCAATTGATGCTCAAGGTCTTGCATCACCAGCAACATCACATTGGTCAGCATCAGCCCCACCGAGCAGATCTTCGAATCATATCAATCATCGTCCGTTAGCTCCCAAGCATTATTCCCCAGTTCAAGTAACTGGGGTACTGCCTGCTCCATCCCTACATGTTCCTCCTAATAGCATGCAGCCATTATTTGTGCCGGTGCCAGTTGCACCTCCCATGCAATTTGCTACACCTGTGCCGATCCCTACTGGCTCTACAGCATGGACCACGGCTCCTCCAAGGCATCCTCCTCCTCCTCCTCCTCGAGTCGTCGTTCCCGGCACAGGAGTCTTCCTCCCTCCCCCTGGCTCAGCTAATTCATCTCAGCACTTGCAAGGTACCTTAACTGAAGTGAACTTAGGTGTTGGTGGAGCCCAAAACTCGTCGATAAAGGAAAATGGGAAAACTAATCATAAAAATACTAATGGTTCACCAAAAGGTAAAAAGGATGGAAATATGCAAAGGCAAGAATGCAATGGAAATACAGATGGAACTGAAGTTGAACAAGCTATAGTGGAAGAAGGGGGGGAAAGAAATGGAGAAACTGTTGCAAGCCAATGA 2031 0.4412 MPMGNAVTPEIKHFPAVVTGGEIQYRPPPQQQQQPQQWFVDERDGFMNWLRSEFAAANAIIDCLVQHLRVVGEGGEYDFVVGAIEQRRVNWNQVLLMQQYFSVSEVAYALQQVAWRRQQKNAKPVVKEFRKVRQWQRFEGGGNVKEGSNSSVESRRGEVNYAVKGSQVVDKSEDYKSSGKVGSKDDKISDSVEVKKDTIRNHQSDGILKTSVNSQGSLSSAECKAVGVNAECASKSGENDSLSMQNQHQNENGSTTGKTFISNEMLDGKMVNVVEGLKLYENLLDSTEVSKLVSLVNDLRVAGRKGQLQGSQTYVVSKRPVRGHGREMIQLGVPVADAPPDMDNMTASFKDKNFESIPSLFQDIVERMAASKVMTVKPDACIVDFYNEGDHSTPNSWPSWFGRPIYTLFLTECEMTFGRTIVSEHHGDFRGNVKLSLVPGSLLVMQGKSADFAKHAIPSIHKQRILVTFTKSLPKKSLPIDAQGLASPATSHWSASAPPSRSSNHINHRPLAPKHYSPVQVTGVLPAPSLHVPPNSMQPLFVPVPVAPPMQFATPVPIPTGSTAWTTAPPRHPPPPPPRVVVPGTGVFLPPPGSANSSQHLQGTLTEVNLGVGGAQNSSIKENGKTNHKNTNGSPKGKKDGNMQRQECNGNTDGTEVEQAIVEEGGERNGETVASQ 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01286 676 SUPERFAMILY Clavaminate synthase-like 268 469 - -
Trre1g01286 676 MobiDBLite consensus disorder prediction 170 189 - -
Trre1g01286 676 MobiDBLite consensus disorder prediction 489 507 - -
Trre1g01286 676 MobiDBLite consensus disorder prediction 236 256 - -
Trre1g01286 676 MobiDBLite consensus disorder prediction 614 655 - -
Trre1g01286 676 MobiDBLite consensus disorder prediction 489 513 - -
Trre1g01286 676 Pfam 2OG-Fe(II) oxygenase superfamily 279 463 IPR027450 -
Trre1g01286 676 Gene3D - 260 477 IPR037151 -
Trre1g01286 676 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 37 626 IPR044842 GO:0003729|GO:0006402|GO:0032451
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01286 Trre-Chr1 9685750 9691926 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g01286 1 9685750 9691926 Trre1g01286 1 9685750 9691926 ECH