Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01284 ATGTGCAGCAAGTATATGGGTGAGTTAGGATTTCACTTTGAGGTCTACCGAAATGACGAGTTAACAGTGGAGGAGTTGAAAAGAAAAAGTCCGAGAGGAGTGTTGATATCACCTGGGCCAGGAGAACCTCAAGATTCAGGCATATCTTTGCAAACAGTTTTGGAACTTGGACCAACTGTACCTGTGTTCGGTGTGTGCATGGGATTGCAGTGCATGGGAGAGGCTTTCGGCGGGAAAATTGTTCGCTCTCCTTATGGTGTGATGCATGGAAAAAGTTCTCTGGTTTATTATGACGAAAAAGGAGAAGATGGATTACTTGCTGGACTACCTAATCCTTTCTTGGCTGCAAGATATCACAGCCTTGTAATTGAAAAGGAGAGCTTTCCTGATGATGAACTTGAGGTTACAGCATGGACTGAAGATGGTCTCATAATGGCTGTTCGACACAAGAAATATCGGCATATGCAGGGTGTGCAGTTTCATCCAGAGAGTATTATAACCCCCGACGGCAAGAAAATCGTCCACAACTTTGTGAAGCTTATAGAGAAAAAGGAGGCTGGTGGTTCTTGA 570 0.4421 MCSKYMGELGFHFEVYRNDELTVEELKRKSPRGVLISPGPGEPQDSGISLQTVLELGPTVPVFGVCMGLQCMGEAFGGKIVRSPYGVMHGKSSLVYYDEKGEDGLLAGLPNPFLAARYHSLVIEKESFPDDELEVTAWTEDGLIMAVRHKKYRHMQGVQFHPESIITPDGKKIVHNFVKLIEKKEAGGS 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01284 189 PRINTS Anthranilate synthase component II signature 61 72 - -
Trre1g01284 189 PRINTS Anthranilate synthase component II signature 157 170 - -
Trre1g01284 189 PRINTS Anthranilate synthase component II signature 110 122 - -
Trre1g01284 189 PRINTS Anthranilate synthase component II signature 34 43 - -
Trre1g01284 189 PRINTS Anthranilate synthase component II signature 87 95 - -
Trre1g01284 189 CDD GATase1_Anthranilate_Synthase 5 178 IPR006221 -
Trre1g01284 189 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 1 187 - -
Trre1g01284 189 NCBIfam glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 179 IPR006221 -
Trre1g01284 189 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 31 45 - -
Trre1g01284 189 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 61 77 - -
Trre1g01284 189 PRINTS Glutamine amidotransferase superfamily signature 61 72 - -
Trre1g01284 189 PRINTS Glutamine amidotransferase superfamily signature 34 43 - -
Trre1g01284 189 PRINTS Glutamine amidotransferase superfamily signature 157 170 - -
Trre1g01284 189 FunFam Anthranilate synthase beta subunit 1 1 180 - -
Trre1g01284 189 Pfam Glutamine amidotransferase class-I 4 178 IPR017926 -
Trre1g01284 189 Gene3D - 1 180 IPR029062 -
Trre1g01284 189 PANTHER MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED 4 185 - -
Trre1g01284 189 SUPERFAMILY Class I glutamine amidotransferase-like 4 183 IPR029062 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01284 Trre-Chr1 9674242 9676394 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g01284 1 9674242 9676394 Trre1g01284 1 9674242 9676394 ECH