Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01278 ATGAGTGCCATTGGAATTTCAGCTTTGGCTCATTTGTTTGGCATCATATCCATCATACTCTTACTTGTTTGGTTGGTGCATTACCGCGAGGGGATCGACTATGATTCCGATTATGGATTACGCATTTTCGATGTACACCCTTTAATGATGTTCTTGGGCTTTATTTTCCTTGTTGGTGAAGCAATTATGGCATTCCAAACGGTACCAGGAGAAAGACATAAGGGAAAGTTTGTTCATATGACACTTCACTTGATTGCTATTGTTTTAGGCATAGTTGGTTTGTGTGCTGTTTTCAAATTCCATAATATGAAAAACATTGCAGACTTTTACAGCCTTCATTCATGGATTGGTATTAGCACCTTCTGCTTGTTTGGTTTGCAGTGGCTATTTGGTTTGATTACATTCATGTTTCCTGGAGCACAAGCTCCAACAAGAGCTAGAATGCTTCCATGGCATAGAGCATGTGGTAGAGTTTTACTTTTCATGGCAATTTGTGCTGCAGAAACAGGATTGATGGAGAAGGTTGGTTTCTTGGATCTGAAGGCATATCATAGAGAAACTAACTTGGTCAACTTTACTGGTCTTTCAATTCTCTTGTTTGGAGTTTTTGTTAACATGTCTGTTGGTGTTCGTTAA 636 0.3899 MSAIGISALAHLFGIISIILLLVWLVHYREGIDYDSDYGLRIFDVHPLMMFLGFIFLVGEAIMAFQTVPGERHKGKFVHMTLHLIAIVLGIVGLCAVFKFHNMKNIADFYSLHSWIGISTFCLFGLQWLFGLITFMFPGAQAPTRARMLPWHRACGRVLLFMAICAAETGLMEKVGFLDLKAYHRETNLVNFTGLSILLFGVFVNMSVGVR 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01278 211 ProSiteProfiles Cytochrome b561 domain profile. 9 209 IPR006593 -
Trre1g01278 211 SMART 561_7 45 171 IPR006593 -
Trre1g01278 211 FunFam Cytochrome b reductase 1 1 210 - -
Trre1g01278 211 Gene3D - 1 210 - -
Trre1g01278 211 PANTHER CYTOCHROME B561-RELATED 5 208 IPR043205 GO:0016491
Trre1g01278 211 CDD Cyt_b561_ACYB-1_like 36 178 - -
Trre1g01278 211 Pfam Eukaryotic cytochrome b561 45 177 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01278 Trre-Chr1 9642218 9643989 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01278 9 210 Chloroplast and Mitochondria Gene Families AT1G14730 52.475 4.82e-76 226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g01278 1 9642218 9643989 Trre1g01278 1 9642218 9643989 ECH