Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01236 ATGGTTAAAAGTAACACAATTGAGTTGTATGGATTCCCTTCTTCTGTGAACGTTTCTGATGTAAAGAGATTTGTAGAGAAGCATACCGGTGAAGGAAGTGTGGTTGCTATGAAGATTCGAGTCGGTAAAGGCCGGATTCCAAGAGCATATGCAATTATTCAATTCACTACTGAAGGACATGCTACATTCATTGCCTTACCTAACAGAAGTTCGTCAATATTGCTGTATGGCAGCTCCTATTTAAAAGTTCGGGAAATGGAAAGAGATATTGATCCAAATCCGAAGGTATTTTTGGACAGTTTGGAGGATGTGAAACTGTATTTTGGCTGTCAGATCTCAAAGGAAAGATTCTCTGTATTATGGAGCAAGGCGGATGTTAGTGTAGATTTTGGGATTGGGATGAAAAAGTGGCGATTCTCTATGTGCCATGACGATAGGAAGTTCAAACTTGAGCTTTCATATGAGAATATTTGGAAGATTGAGCTGCATCAACCACAGGGTAAAACTGCAAAGTATCTATTGATTCAGTTATTAGGTGCTCCTCGGGTTTATGAGCTTTATGTTCCTGATCCTTTGAAGAACTATAATAAATATTCCCCCGATGACCAATGGATCCGTGCAATAGATTTCACTCCTTGCAGTTGTATTGGCCAGTCTTCTGCTATATGTGTAGAGCTTCCTAGTAACAGAGATTTTCCGAATTTCCGGGCAAACTGTGCTCATTATGAGGAAAGTGATGGTCAATACACATTGCAGATCGGATCACCTTTTTCTTCCAATCCAGATGTTGTCCCAATGGTTAACTCATTGGTTCAGCACGGGTGTGTTTCAGGTTCTGAACTCAATAATGATTTCTATCGTCTAGTTGATCCACGTAGAATGATCGTCGGTTATATCGAGCATGCTTTAGAGAAGATGTACTATTCAAAGGATTTCTGTTATGAACCAGTAAAATGGCTGAAAGATCAATACAGAATGTACCTTGGTGCAAATACTCCGCCTCGGTCACCTACTATATCTTTGGATAACGGGTTGGTATATATTCGCAGGGCTCAGATAACTCCATGCAAAGTATACTTTTGTGGTCCAGAGATTAATGTCTCGAATCGTGTTCTCCGTCATTTCCACGAACATATCGATAACTTTCTGCGTGTTTCATTTGTTGACGAGGAGTTGGATAATCTGTATTCAGCAGATTTATCTACACGTATTTCTAAGCATGGGAAAACTGGGATATACTATAGAATTCTTTCCATTCTTATGAATGGCTTAGATATTGGTGGTAAGAAGTTTGAATTTCTAGCTTTCTCATCAAGTCAGTTGCGTGAAAATTCCCTATGGATGTTTGCTCGTACAACAACTGGATTTACTGCCGATTCCATAAGGGAATGGATGGGAGATTTTAGCCGGATAAGAAATGTGGCTAAATATGCTGCTAGACTTGGACAATCTTTCGGTTCGTCTACGGAAACTCTAAGTGCCTTTAGGGACGAAATTGAAATTATTCCTGACGCAAAGGTTAGACATGGTGCAACCGAATATGTCTTCTCTGATGGAATTGGGAAAATATCTCTTGAATTTGCACGGAAGGTGGCTAAAAAATGTGGTTATGATTCAATTCCGTCCGCGTTTCAGATTAGATATGGCGGGTACAAAGGAGTTGTGGCTGTTGATCCAACCTCGTCTGTGAAGCTGTCGCTGAGGAATAGTATGCACAAGTATGATTCATATAACAAAAAACTGGATGTTTTGGCATGTAGTAAGTTTCAGCCTTGTTATTTGAATCGACAGTTGATTACTCTCTTATCTACTGTTGATGTCAAGGACAGTATTTTCGAGAAAAAACAGAAGGAAGCTGTTGATCAATTGAACACAATACTAACAGATTCGACGAAGGCACAGGAGGTTTTGGACTTGATGACTTCCGGAGAGGTCACTAATATTTTGAAGGAGATGCTTATTTGTGGCTACAAGCCTAATGTTGAACCATTTCTTTCGATGATGCTGCAGACATTTAGGGCATCGAAACTGTTGGAATTGCGACAAAAAACTAGGATATTTATTCCAAAAGGAAGAGCAATGATGGGAGTTCTAGATGAAACTAAAACCTTAGAATATGGTGAAGTTTTTGTTCAATATTCTAACAATAGGCTAAGCAATATTTCTCATGTAGTTAAAGATTTGCGGCACATGGTGGATTGCATTGTTTTCCCTCAAAAAGGTGAAAGGCCGCATCCAAATGAATGTTCGGGAAGCGATCTAGACGGGGACATCTACTTTGTCTGTTGGGATTCTGAATTAGTTCCACCTAGAACAATTGATCCTTTGGAGTATGATACTGCCCAACCAATTGTATTGGATCGTGATGTGGAGATTGAGGAGGTGCAGGAGTATTTTGCCAATTACATAGTCAATGACAGTCTTGGAATAATTGCCAATGCACACACTGTCTTTGCAGATAAAGAACCTCTTAAAGCAATGGCTGAGCCATGTGTTGAACTTGCAAAGCTATTCTCAACAGCAGTTGACTTTCCAAAAACCGGTATCCCAGCAGAAATACCATCTCGTCTTTTCGCCAAAGAATATCCAGACTTCATGGAAAAGCTTGACAAACCCACCTACAAATCAAAAAATGTTATAGGAAAACTCTTTAGAGAAATTCAAGGAATTTCTTCAAAGGATGGTTCTATTACATCCTTTACAGTTGAAGTGGCCGAAAAGTCGTATGATCCCGGCATGGAATTTGAAGGCTTTATGGATTATGTCGATGATGCGTTCTATTACAAAACCAATTATGACTACAGGTTGGGAAATCTGATGGACTACTATGGTATCAAAACTGAATCAGAAATCCTTAGTGGTAATATTATGAAAATGTCAAAATCTTTCACCAAAAGAAGGGATGCGGATGCGATTTCTAAGGCTGTAAGTTCCTTAAGGAAAGAGGCGAGGAGTTGGTTCCATGAAGGCGGCACTGATGTAGATTCTGGGAGTGATGATGCATATGCAAAAGCTTCTGCTTGGTACTATGTTACTTACCATCATAGTTACTATGGTTTGTACAATGAAGGTATGCAGAGGGACCATTTTCTAAGCTTTCCATGGTGTGTTTCCCATTTGCTTGTTCAAATCAAGAAGGCGAGTGCAAGGACGAGGATCCATGCTAGCATGGAGCAAAGTTTCAGTCGTCGGTTGCGTCTTGATTGA 3207 0.3982 MVKSNTIELYGFPSSVNVSDVKRFVEKHTGEGSVVAMKIRVGKGRIPRAYAIIQFTTEGHATFIALPNRSSSILLYGSSYLKVREMERDIDPNPKVFLDSLEDVKLYFGCQISKERFSVLWSKADVSVDFGIGMKKWRFSMCHDDRKFKLELSYENIWKIELHQPQGKTAKYLLIQLLGAPRVYELYVPDPLKNYNKYSPDDQWIRAIDFTPCSCIGQSSAICVELPSNRDFPNFRANCAHYEESDGQYTLQIGSPFSSNPDVVPMVNSLVQHGCVSGSELNNDFYRLVDPRRMIVGYIEHALEKMYYSKDFCYEPVKWLKDQYRMYLGANTPPRSPTISLDNGLVYIRRAQITPCKVYFCGPEINVSNRVLRHFHEHIDNFLRVSFVDEELDNLYSADLSTRISKHGKTGIYYRILSILMNGLDIGGKKFEFLAFSSSQLRENSLWMFARTTTGFTADSIREWMGDFSRIRNVAKYAARLGQSFGSSTETLSAFRDEIEIIPDAKVRHGATEYVFSDGIGKISLEFARKVAKKCGYDSIPSAFQIRYGGYKGVVAVDPTSSVKLSLRNSMHKYDSYNKKLDVLACSKFQPCYLNRQLITLLSTVDVKDSIFEKKQKEAVDQLNTILTDSTKAQEVLDLMTSGEVTNILKEMLICGYKPNVEPFLSMMLQTFRASKLLELRQKTRIFIPKGRAMMGVLDETKTLEYGEVFVQYSNNRLSNISHVVKDLRHMVDCIVFPQKGERPHPNECSGSDLDGDIYFVCWDSELVPPRTIDPLEYDTAQPIVLDRDVEIEEVQEYFANYIVNDSLGIIANAHTVFADKEPLKAMAEPCVELAKLFSTAVDFPKTGIPAEIPSRLFAKEYPDFMEKLDKPTYKSKNVIGKLFREIQGISSKDGSITSFTVEVAEKSYDPGMEFEGFMDYVDDAFYYKTNYDYRLGNLMDYYGIKTESEILSGNIMKMSKSFTKRRDADAISKAVSSLRKEARSWFHEGGTDVDSGSDDAYAKASAWYYVTYHHSYYGLYNEGMQRDHFLSFPWCVSHLLVQIKKASARTRIHASMEQSFSRRLRLD 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01236 1068 PANTHER RNA-DEPENDENT RNA POLYMERASE 5 1057 IPR007855 GO:0003968
Trre1g01236 1068 Pfam RNA dependent RNA polymerase 724 887 IPR007855 GO:0003968
Trre1g01236 1068 Pfam RNA dependent RNA polymerase 353 717 IPR007855 GO:0003968
Trre1g01236 1068 CDD RRM_SF 7 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01236 Trre-Chr1 9400401 9404782 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g01236 1 9400401 9404782 Trre1g01236 1 9400401 9404782 ECH