Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01231 ATGTGCAAGACAATTCAAATACATGGATTCCCATCTACTGTTTCTGCTGAAGAGGTAACAAAATTTTTGGAACAACATGTTGGCTTCCAAACTGTTCTTGCTGTAAAGATTGAGCAACATAAAGAAGAAGATTCTATGACACATGTTAAAGTTCAATTCACAGACAAAAAAAGTGTTGAAACAATCTTAAACTTGGTTACTAATAAACACTTATCTTACATTAACTATGTTCTAAATGCTACATTAATAAAACCTGACATTTTGTCAAAGCCAAGAATCTTTGCTTACAATATGGAAGGTATTGGAATTCACTTTGGTTGTCAAACATCTAAGGGAAAACTTAGTGTGCTATGGGAACATTCAAATGCTTCTGTTAAATTTGGAGCCAGATTGAGAAAAATGTATATATTTTTTCACTATTTGTCTAAAGATTATAAGCTGCAGATCAATTCCGAGAGTATATCGCGAATTGAGTTGCATCACTCACATTCTCGTACCAAGAAGCTTCTCCTTTTTCAGTTACGTAGTGCTCCTCGGATCTACGAGAAAGATGTTTCCGAAATCAAGTACTTTAAGGAAGCTTATGACAATCATTGGTTTAGAAGTGTCGATTTCACCTCATCATGCTGCATTGGACAATCATCAGCTTTATGTTTTGAGCTTCCACAAAGTACTGAGGTTCCGAATTTTCGTCAACACTATCGAAATTATTATAAATTCGATGACACCTTTGATCTTGAAAAACAACTTGGTTTCTCATCAAAATTCGATTTTGTTCCCATGGTGGTTCCACCAGAAGGATTCAACTTGCCATACAAATTTCTGTTCAAAATCAACTCCTTAGTTCAACATGGTTGCCTTCCTTTGCAAGCAATCGACACCGACCTTTTTCATATGGTTGATCCAAAAAGAATAAAAGCTGAATATATAGAAAGTGCTTTGAATCGATTGCATATGATGAAAGAATGCTGCTATGAACCTGTTCAATGGTTGGAGAAACAATATCAACGATACTCGAAAAATAGTTCACTTCCATTATCTAGTACCATTTCATTAGATAATGGTTTGGTGTATGTTCATAGAGTACAAGTAACTCCATCCAAAATTTATTTTTGTGGTCCTGAAGTGAATCTTTCTAATCGAGTTTTGCGCAACTTTCCTAAAGACACCGATAACTTCCTTCGTGTTTCTTTTGTGGATGAGAACATGGATAAACTCCGTTCGTCCGATTTTTTGTTGCGATCCTCTTGTATAGAAGTGGGCAGAGAAACAAAGGTTCATAAAAGAGTACTGTCTACACTAAAAAACGGCATAGAAATCGGTGACAAGAAGTTCGAGTTTCTTGCTTTCTCATCAAGTCAACTACGAGATAACTCGGCATGGATGTTTGCATCAAGAAAAGGACTAACCGCGTGTGATATAAGAAAATGGATGGGAGATTTTAATGAAATTAGGAATGTGGCAAAATATGCAGCAAGGCTTGGTCAATCATTCAGCTCTTCAAGGGAAACGGTTAGTGTTGAAAGACACGAAATCGAAATCATTCCTGATATAGAATTGATAAGAGGTGAAAGAAAATATTGTTTCTCTGATGGAATAGGGAAGATATCTTATCAATTGGCTCAAGAAGTTGCTAAAAAATGTGGCTGCAAAGATCATATTATTCCATCTGCATTTCAAATAAGATATGGCGGTTACAAAGGTGTTGTTGCTATTGATCCTAATTCATCAACTAAGCTTTCATTGAGAAATAGCATGTGCAAGTTCAAGTCAGAAAACACAAAACTAGATGTGTTATCATGGAGCAAAAACAAACCGTGCTTTCTTAACCGTCAAGTAATCGTTCTCTTGTCCACGCTCGGCGTCAAGGATCGAGTCTTTACAAGGATGCAAAGGGAGATTGTAAATAAACTCAAAATGATATCAAGAAAACCATTCATTGCACTAGACATGATGTCACAAGGAGAGATTACAAACATGTTAAGAGAAATGCTTATTGGTGGATTCCATTCAAAAAATGAACCTTTTCTTTCCATGATGTTGAAAACAATATGTGCATCAAAGTTACAAGAGTTACAGCTCAAAACAAGGATATTTGTTAGGAAAGGAAGATCAATGTTAGGATGCTTGGATGAAACTAGGACATTAAAATATGGAGAGGTATTTGTGCAAACATCTCTTTCTTCTAAGGGCATTGGACCAAAACAAGGTAAATATATTGTTAAGGGGAAGGTAGTTGTAGCAAAGAATCCATGTCTACATCCAGGAGATGTAAGGATTTTGAGAGCAGTTGATGTACCTTCCTTACATCATATGGTTGATTGTGTTGTTTTCCCACAGAAAGGGAGAAGACCACATCCTAATGAATGTTCAGGAAGTGACTTGGATGGAGATATCTACTTTGTTTGTTGGGATCCTGCTCTTATTCCTCCCCATCAAGAAAGTCCAATGGATCATTCACCCTCTAAAGTCATGAATGTGGATCATGATGTCACTTTACAGGATGTAGAGGAACATTTCACTCACTACATTGTTAAAGACACCTTAGGAATTATTGCAACTGCACACACTGTGTTTGCTGATAAGGATGCAGAAAAGGCAATGAGCCTTTCATGCATAGAGCTTGCAAAACTGCACTCAATTGCCGTCGATTTTGCAAAATCCGGTGTCCCGGCTGAAATACCACAACATCTACAAGTGGATCAGTATCCAGATTTCATGGAAAAGCAAAACAAACCAACTTATCAATCAAAAAACATAATCGGAAAGCTTTACCGTGAGGTTAAGAATGTTTCACAACATAATAATAGCCACAAAAAATCATTCACTAGAAAAACTGCATTGAAGTTATATGATCATGACATGAAAATTGATGGTTTTGAAATGTACACAAAAATTGCTTGTGAATACAAACACATGTATGATACCAAGTTGTTGAACTTAATGGATTACTATGGTATAGAAACAGAAGCAGAAATAATTAGTGGAAATATCTTAAAGATGTCAAAATCTTTTAATGATAGAAAAGATAAAGAAGGAATAAACCATGCTGTGATGTCATTAAGGAATGAAGCTAGAGATTGGTTCAATGAGATGATAAGAAATTCTCAATATGGTGATGATGATGATTCTTATGCTATAGCTTCTGCTTGGTATTATGTAACATATCATCCTAGTTATTGGGGATGCTATAATGAGGGACTAAATAAGGATCATTTCCTAAGTTTTCCATGGTGTGTTTATGATATTCTCATTCAGATAAAGAAGGACAAAGCCAATAGTAGAACTTATGAAATGAAGGTTTGGACACCACTTAATATGTTTCTCATCACATTAATGTTTTGCATCTTATTGTTGATAATAGTGCATATTTATCATAAGAATTTGTATAGGTAA 3396 0.3542 MCKTIQIHGFPSTVSAEEVTKFLEQHVGFQTVLAVKIEQHKEEDSMTHVKVQFTDKKSVETILNLVTNKHLSYINYVLNATLIKPDILSKPRIFAYNMEGIGIHFGCQTSKGKLSVLWEHSNASVKFGARLRKMYIFFHYLSKDYKLQINSESISRIELHHSHSRTKKLLLFQLRSAPRIYEKDVSEIKYFKEAYDNHWFRSVDFTSSCCIGQSSALCFELPQSTEVPNFRQHYRNYYKFDDTFDLEKQLGFSSKFDFVPMVVPPEGFNLPYKFLFKINSLVQHGCLPLQAIDTDLFHMVDPKRIKAEYIESALNRLHMMKECCYEPVQWLEKQYQRYSKNSSLPLSSTISLDNGLVYVHRVQVTPSKIYFCGPEVNLSNRVLRNFPKDTDNFLRVSFVDENMDKLRSSDFLLRSSCIEVGRETKVHKRVLSTLKNGIEIGDKKFEFLAFSSSQLRDNSAWMFASRKGLTACDIRKWMGDFNEIRNVAKYAARLGQSFSSSRETVSVERHEIEIIPDIELIRGERKYCFSDGIGKISYQLAQEVAKKCGCKDHIIPSAFQIRYGGYKGVVAIDPNSSTKLSLRNSMCKFKSENTKLDVLSWSKNKPCFLNRQVIVLLSTLGVKDRVFTRMQREIVNKLKMISRKPFIALDMMSQGEITNMLREMLIGGFHSKNEPFLSMMLKTICASKLQELQLKTRIFVRKGRSMLGCLDETRTLKYGEVFVQTSLSSKGIGPKQGKYIVKGKVVVAKNPCLHPGDVRILRAVDVPSLHHMVDCVVFPQKGRRPHPNECSGSDLDGDIYFVCWDPALIPPHQESPMDHSPSKVMNVDHDVTLQDVEEHFTHYIVKDTLGIIATAHTVFADKDAEKAMSLSCIELAKLHSIAVDFAKSGVPAEIPQHLQVDQYPDFMEKQNKPTYQSKNIIGKLYREVKNVSQHNNSHKKSFTRKTALKLYDHDMKIDGFEMYTKIACEYKHMYDTKLLNLMDYYGIETEAEIISGNILKMSKSFNDRKDKEGINHAVMSLRNEARDWFNEMIRNSQYGDDDDSYAIASAWYYVTYHPSYWGCYNEGLNKDHFLSFPWCVYDILIQIKKDKANSRTYEMKVWTPLNMFLITLMFCILLLIIVHIYHKNLYR 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01231 1131 Pfam RNA dependent RNA polymerase 364 928 IPR007855 GO:0003968
Trre1g01231 1131 PANTHER RNA-DEPENDENT RNA POLYMERASE 3 1091 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01231 Trre-Chr1 9353702 9358062 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g01231 1 9353702 9358062 Trre1g01231 1 9353702 9358062 ECH