Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g01228 ATGAAAAAGTCTGTTGAAAAGCTTGGTTCTTCTACACAGGGTTATGGGGACCCAACATTAATGAGGTTTTTGATTGCACGGTCAATGGAATCAGATAAAGCAGCAAAGATGTTTGTCCAATGGAAGAAATGGAGGGATACTATGGTTCCTAATGGATTCATTTCAGATTCTGAAGTTCCTGATGAATTAGAAAATAGAAAGATCTTTTTGCAGGGTTTGTCTCAAGATAAATATCCTGTCATGATTGTTCAAGCAAGTAGACACTTCCCTTCCAAGGATCAAGTTCAATTCAAGAAATTTATTGTACATTTACTCGACAAGACAATCGCGAGTGCTTTCAAGGGAAGGGAGGTAGGAAATGAAAAGCTGATTGGAATTCTTGATCTGCAGAATATTTCGTATAAGAATGTCGATGCACGTGGTTTAATTACTGGATTTCAATTTTTGCAGGGTTACTACCCGGAACGTTTAGCAAAGTGTTATATTTTACATATGCCATGGTTTTTTGTGAGTGTTTGGAGACTAGTTTCTACCTTCCTTGACAAGGCAACACAAGATAAGATTGTAATTATTAGCAATGAGGATGAGAAAAAGGAGTTCATAAGTGAAGTTGGTGAAGATATTCTTCCAGAAGAGTATGGTGGAAGAGCAAAGCTTGTACCTATCCAAGATGTTGAAGTGATATCATTGGAAAATGGAAGAACAAATTGA 711 0.3685 MKKSVEKLGSSTQGYGDPTLMRFLIARSMESDKAAKMFVQWKKWRDTMVPNGFISDSEVPDELENRKIFLQGLSQDKYPVMIVQASRHFPSKDQVQFKKFIVHLLDKTIASAFKGREVGNEKLIGILDLQNISYKNVDARGLITGFQFLQGYYPERLAKCYILHMPWFFVSVWRLVSTFLDKATQDKIVIISNEDEKKEFISEVGEDILPEEYGGRAKLVPIQDVEVISLENGRTN 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g01228 236 PANTHER OS03G0850700 PROTEIN 1 225 - -
Trre1g01228 236 SUPERFAMILY CRAL/TRIO domain 57 218 IPR036865 -
Trre1g01228 236 Gene3D - 1 226 IPR036865 -
Trre1g01228 236 CDD SEC14 69 215 IPR001251 -
Trre1g01228 236 Pfam CRAL/TRIO domain 65 215 IPR001251 -
Trre1g01228 236 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 56 221 IPR001251 -
Trre1g01228 236 SUPERFAMILY CRAL/TRIO N-terminal domain 2 54 IPR036273 -
Trre1g01228 236 SMART sec14_4 62 218 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g01228 Trre-Chr1 9333087 9336221 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g01228 1 192 Acyl Lipid Metabolism Gene Families AT5G47730 24.757 1.94e-13 66.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g01228 1 9333087 9336221 Trre1g01228 1 9333087 9336221 ECH